RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 HMG20BQ9P0W2 317 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 ATP5JP18859 108 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 TRIM29Q14134 588 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 BICDL1Q6ZP65 573 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 STX1AQ16623 288 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 GPIHBP1Q8IV16 184 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 PCDHA7Q9UN72 937 aa15.53■□□□□ 0.08
USP42-203ENST00000426246 IFIT5Q13325 482 aaKnown RBP15.52■□□□□ 0.08
USP42-203ENST00000426246 STAMQ92783 540 aa15.52■□□□□ 0.08
USP42-203ENST00000426246 ELF2Q15723 593 aa15.52■□□□□ 0.07
USP42-203ENST00000426246 CCDC24Q8N4L8 307 aa15.52■□□□□ 0.07
USP42-203ENST00000426246 XAGE2Q96GT9 111 aa15.52■□□□□ 0.07
USP42-203ENST00000426246 SLC26A6Q9BXS9 759 aa15.52■□□□□ 0.07
USP42-203ENST00000426246 PUS7LQ9H0K6 701 aaKnown RBP15.52■□□□□ 0.07
USP42-203ENST00000426246 ZNF215Q9UL58 517 aaPredicted RBP15.52■□□□□ 0.07
USP42-203ENST00000426246 POLR3GO15318 223 aaPredicted RBP15.51■□□□□ 0.07
USP42-203ENST00000426246 NRDCO43847 1150 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 URI1O94763 535 aaPredicted RBP15.51■□□□□ 0.07
USP42-203ENST00000426246 ANO10Q9NW15 660 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 FGAP02671 866 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 KCNQ4P56696 695 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 RESTQ13127 1097 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 TRMT112Q9UI30 125 aaKnown RBP15.51■□□□□ 0.07
USP42-203ENST00000426246 ZNF609O15014 1411 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 CIAO1O76071 339 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 ATP1A3P13637 1013 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 PDIA3P30101 505 aaKnown RBP15.51■□□□□ 0.07
USP42-203ENST00000426246 MRPS27Q92552 414 aaKnown RBP15.51■□□□□ 0.07
USP42-203ENST00000426246 IL17RAQ96F46 866 aa15.51■□□□□ 0.07
USP42-203ENST00000426246 C4AP0C0L4 1744 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 C4BP0C0L5 1744 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 MAST3O60307 1309 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 COL4A1P02462 1669 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 RNF113AO15541 343 aaKnown RBP15.5■□□□□ 0.07
USP42-203ENST00000426246 SFPQP23246 707 aaKnown RBP eCLIP15.5■□□□□ 0.07
USP42-203ENST00000426246 TRMT44Q8IYL2 757 aaKnown RBP15.5■□□□□ 0.07
USP42-203ENST00000426246 XPO4Q9C0E2 1151 aaKnown RBP15.5■□□□□ 0.07
USP42-203ENST00000426246 DNAI1Q9UI46 699 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 STX17P56962 302 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 TPM4P67936 248 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 CTDSPL2Q05D32 466 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 TTLL11Q8NHH1 800 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 ALG1Q9BT22 464 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 NAT10Q9H0A0 1025 aaKnown RBP15.5■□□□□ 0.07
USP42-203ENST00000426246 KCNJ14Q9UNX9 436 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 CNTNAP4Q9C0A0 1308 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 SPTLC2O15270 562 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 TMEM87AQ8NBN3 555 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 COL24A1Q17RW2 1714 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 RIC1Q4ADV7 1423 aa15.5■□□□□ 0.07
USP42-203ENST00000426246 MEX3CQ5U5Q3 659 aaKnown RBP15.49■□□□□ 0.07
USP42-203ENST00000426246 RASSF8Q8NHQ8 419 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 AIDAQ96BJ3 306 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 FUCA2Q9BTY2 467 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 EPC1Q9H2F5 836 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 EYA2O00167 538 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 CGNQ9P2M7 1197 aaKnown RBP15.49■□□□□ 0.07
USP42-203ENST00000426246 TRPC5Q9UL62 973 aaPredicted RBP15.49■□□□□ 0.07
USP42-203ENST00000426246 GPAA1O43292 621 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 PRDM1O75626 825 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 GTF2E1P29083 439 aaPredicted RBP15.49■□□□□ 0.07
USP42-203ENST00000426246 PNOCQ13519 176 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 SUSD4Q5VX71 490 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 EEF2KMTQ96G04 330 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 HAUS7Q99871 368 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 SENP2Q9HC62 589 aa15.49■□□□□ 0.07
USP42-203ENST00000426246 TDO2P48775 406 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 AMIGO3Q86WK7 504 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 ZSCAN16Q9H4T2 348 aaPredicted RBP15.48■□□□□ 0.07
USP42-203ENST00000426246 GPR108Q9NPR9 543 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 RNF216Q9NWF9 866 aaPredicted RBP15.48■□□□□ 0.07
USP42-203ENST00000426246 BAZ2BQ9UIF8 2168 aaKnown RBP15.48■□□□□ 0.07
USP42-203ENST00000426246 IFIT3O14879 490 aaKnown RBP15.48■□□□□ 0.07
USP42-203ENST00000426246 CTDNEP1O95476 244 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 AFMP43652 599 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 METAP2P50579 478 aaKnown RBP eCLIP15.48■□□□□ 0.07
USP42-203ENST00000426246 GRAMD1CQ8IYS0 662 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 MNS1Q8NEH6 495 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 ST7Q9NRC1 585 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 IL15P40933 162 aaPredicted RBP15.48■□□□□ 0.07
USP42-203ENST00000426246 CTSWP56202 376 aa15.48■□□□□ 0.07
USP42-203ENST00000426246 CPLX2Q6PUV4 134 aaKnown RBP15.48■□□□□ 0.07
USP42-203ENST00000426246 TPM3P06753 285 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 FAM160A1Q05DH4 1040 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 MTERF4Q7Z6M4 381 aaKnown RBP15.47■□□□□ 0.07
USP42-203ENST00000426246 SEPT12Q8IYM1 358 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
USP42-203ENST00000426246 GREM2Q9H772 168 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 ARAP2Q8WZ64 1704 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 SNW1Q13573 536 aaKnown RBP15.47■□□□□ 0.07
USP42-203ENST00000426246 ERCC6LQ2NKX8 1250 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 SMIM5Q71RC9 77 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 LRRC8AQ8IWT6 810 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 IRS4O14654 1257 aaPredicted RBP15.47■□□□□ 0.07
USP42-203ENST00000426246 SYKP43405 635 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 TMEM67Q5HYA8 995 aa15.47■□□□□ 0.07
USP42-203ENST00000426246 A0A1B0GUL6 1792 aa15.46■□□□□ 0.07
USP42-203ENST00000426246 SPEF2Q9C093 1822 aa15.46■□□□□ 0.07
USP42-203ENST00000426246 ZNF202O95125 648 aa15.46■□□□□ 0.07
USP42-203ENST00000426246 FBXO3Q9UK99 471 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms