RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 LRRC2Q9BYS8 371 aa17.02■□□□□ 0.31
CDK3-201ENST00000425876 TMX4Q9H1E5 349 aaPredicted RBP17.02■□□□□ 0.31
CDK3-201ENST00000425876 ANAPC4Q9UJX5 808 aa17.02■□□□□ 0.31
CDK3-201ENST00000425876 KIAA1551Q9HCM1 1747 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 CCDC88AQ3V6T2 1871 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 H0YIN7 160 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 C6orf229H3BNL8 230 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 PDCP20941 246 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 SYT1P21579 422 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 AKNAD1Q5T1N1 836 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 DZIP1Q86YF9 867 aaKnown RBP17.01■□□□□ 0.31
CDK3-201ENST00000425876 MPNDQ8N594 471 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 STAG1Q8WVM7 1258 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 SGIP1Q9BQI5 828 aa17.01■□□□□ 0.31
CDK3-201ENST00000425876 STX6O43752 255 aa17■□□□□ 0.31
CDK3-201ENST00000425876 ANTXR2P58335 489 aa17■□□□□ 0.31
CDK3-201ENST00000425876 C2CD5Q86YS7 1000 aa17■□□□□ 0.31
CDK3-201ENST00000425876 CERS3Q8IU89 383 aa17■□□□□ 0.31
CDK3-201ENST00000425876 SLC16A10Q8TF71 515 aa17■□□□□ 0.31
CDK3-201ENST00000425876 TBC1D22AQ8WUA7 517 aa17■□□□□ 0.31
CDK3-201ENST00000425876 GPR101Q96P66 508 aaPredicted RBP17■□□□□ 0.31
CDK3-201ENST00000425876 MTA3Q9BTC8 594 aa17■□□□□ 0.31
CDK3-201ENST00000425876 KRT23Q9C075 422 aa17■□□□□ 0.31
CDK3-201ENST00000425876 COA1Q9GZY4 146 aa17■□□□□ 0.31
CDK3-201ENST00000425876 RNF41Q9H4P4 317 aaPredicted RBP17■□□□□ 0.31
CDK3-201ENST00000425876 FAM205AQ6ZU69 1335 aa17■□□□□ 0.31
CDK3-201ENST00000425876 LDHCP07864 332 aa16.99■□□□□ 0.31
CDK3-201ENST00000425876 DYNLL1P63167 89 aaKnown RBP16.99■□□□□ 0.31
CDK3-201ENST00000425876 APOBRQ0VD83 1088 aa16.99■□□□□ 0.31
CDK3-201ENST00000425876 TMEM87BQ96K49 555 aa16.99■□□□□ 0.31
CDK3-201ENST00000425876 CRNKL1Q9BZJ0 848 aaKnown RBP16.99■□□□□ 0.31
CDK3-201ENST00000425876 ATP8A2Q9NTI2 1148 aa16.99■□□□□ 0.31
CDK3-201ENST00000425876 ZSCAN22P10073 491 aaPredicted RBP16.98■□□□□ 0.31
CDK3-201ENST00000425876 PCP11498 1178 aaKnown RBP16.98■□□□□ 0.31
CDK3-201ENST00000425876 PDIA3P30101 505 aaKnown RBP16.98■□□□□ 0.31
CDK3-201ENST00000425876 SCRN1Q12765 414 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 STK3Q13188 491 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 SKOR2Q2VWA4 1001 aaPredicted RBP16.98■□□□□ 0.31
CDK3-201ENST00000425876 DPP8Q6V1X1 898 aaPredicted RBP16.98■□□□□ 0.31
CDK3-201ENST00000425876 MFSD6Q6ZSS7 791 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 PPP4CP60510 307 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 PPARAQ07869 468 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 CHST3Q7LGC8 479 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 SMARCC2Q8TAQ2 1214 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 SDR42E1Q8WUS8 393 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 CNKSR1Q969H4 720 aa16.98■□□□□ 0.31
CDK3-201ENST00000425876 ZNF622Q969S3 477 aaKnown RBP eCLIP16.98■□□□□ 0.31
CDK3-201ENST00000425876 ANGEL1Q9UNK9 670 aaKnown RBP16.98■□□□□ 0.31
CDK3-201ENST00000425876 NEDD4P46934 1319 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 B4E1Z4 1266 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 TRAK2O60296 914 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 HMGN5P82970 282 aaKnown RBP16.97■□□□□ 0.31
CDK3-201ENST00000425876 CTDSPL2Q05D32 466 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 CYB5R4Q7L1T6 521 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 EYA3Q99504 573 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 ZC3H12CQ9C0D7 883 aaKnown RBP16.97■□□□□ 0.31
CDK3-201ENST00000425876 SUGT1Q9Y2Z0 365 aa16.97■□□□□ 0.31
CDK3-201ENST00000425876 SH2B2O14492 632 aaPredicted RBP16.96■□□□□ 0.31
CDK3-201ENST00000425876 BAG3O95817 575 aa16.96■□□□□ 0.31
CDK3-201ENST00000425876 LIFRP42702 1097 aa16.96■□□□□ 0.31
CDK3-201ENST00000425876 LARP1BQ659C4 914 aaKnown RBP16.96■□□□□ 0.31
CDK3-201ENST00000425876 SLF2Q8IX21 1173 aa16.96■□□□□ 0.31
CDK3-201ENST00000425876 FAM163AQ96GL9 167 aaPredicted RBP16.96■□□□□ 0.31
CDK3-201ENST00000425876 AATFQ9NY61 560 aaKnown RBP eCLIP16.96■□□□□ 0.31
CDK3-201ENST00000425876 MTMR6Q9Y217 621 aa16.96■□□□□ 0.31
CDK3-201ENST00000425876 JAG2Q9Y219 1238 aa16.96■□□□□ 0.31
CDK3-201ENST00000425876 ATP6V1DQ9Y5K8 247 aa16.96■□□□□ 0.31
CDK3-201ENST00000425876 DHX16O60231 1041 aaKnown RBP16.95■□□□□ 0.3
CDK3-201ENST00000425876 FGRP09769 529 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 SBK1Q52WX2 424 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 CC2D2BQ6DHV5 1058 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 MCTP1Q6DN14 999 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 SGMS1Q86VZ5 419 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 NSUN7Q8NE18 718 aaKnown RBP16.95■□□□□ 0.3
CDK3-201ENST00000425876 IGDCC4Q8TDY8 1250 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 DCP1AQ9NPI6 582 aaPredicted RBP16.95■□□□□ 0.3
CDK3-201ENST00000425876 KIF3AQ9Y496 699 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 CHD4Q14839 1912 aa16.95■□□□□ 0.3
CDK3-201ENST00000425876 KLF18A0A0U1RQI7 1052 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 F13A1P00488 732 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 NT5C2P49902 561 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 NOL10Q9BSC4 688 aaKnown RBP16.94■□□□□ 0.3
CDK3-201ENST00000425876 GPHNQ9NQX3 736 aaPredicted RBP16.94■□□□□ 0.3
CDK3-201ENST00000425876 ZSWIM5Q9P217 1185 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 PPP1R1BQ9UD71 204 aaPredicted RBP16.94■□□□□ 0.3
CDK3-201ENST00000425876 TACC3Q9Y6A5 838 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 MROH7-TTC4A0A0A0MT08 1334 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 C10orf71Q711Q0 1435 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 GRIK5Q16478 980 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 MFSD14BQ5SR56 506 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 CTR9Q6PD62 1173 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 C7orf43Q8WVR3 580 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
CDK3-201ENST00000425876 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
CDK3-201ENST00000425876 BRPF3Q9ULD4 1205 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 HPS5Q9UPZ3 1129 aa16.94■□□□□ 0.3
CDK3-201ENST00000425876 MINDY4BA8MYZ0 360 aa16.93■□□□□ 0.3
CDK3-201ENST00000425876 JAK2O60674 1132 aa16.93■□□□□ 0.3
CDK3-201ENST00000425876 KDM4AO75164 1064 aa16.93■□□□□ 0.3
CDK3-201ENST00000425876 CTDNEP1O95476 244 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms