RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 RNF181Q9P0P0 153 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZNRF3Q9ULT6 936 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 KDM2BQ8NHM5 1336 aa8.69□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ECE2O60344 883 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 HIBADHP31937 336 aaKnown RBP8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 PHKA1P46020 1223 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 NUCB1Q02818 461 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CCDC102BQ68D86 513 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CLASRPQ8N2M8 674 aaKnown RBP8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 DBNDD2Q9BQY9 259 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CCDC8Q9H0W5 538 aaPredicted RBP8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 DBNDD1Q9H9R9 158 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 TLR7Q9NYK1 1049 aaKnown RBP8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 PLA2G2EQ9NZK7 142 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 DBNLQ9UJU6 430 aaKnown RBP8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 SALL3Q9BXA9 1300 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CCDC88AQ3V6T2 1871 aa8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 DICER1Q9UPY3 1922 aaKnown RBP8.68□□□□□ -1.02
CHCHD3P1-201ENST00000425516 VIL1P09327 827 aaKnown RBP8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ARID4AP29374 1257 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CXCL9Q07325 125 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CAVIN4Q5BKX8 364 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ANKRD45Q5TZF3 282 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 FAM205AQ6ZU69 1335 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZNF804AQ7Z570 1209 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 AACSQ86V21 672 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 NIM1KQ8IY84 436 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 C16orf71Q8IYS4 520 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 JDP2Q8WYK2 163 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ARAP2Q8WZ64 1704 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZNF512BQ96KM6 892 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 NEUROD6Q96NK8 337 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 PPP4R2Q9NY27 417 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZC3H4Q9UPT8 1303 aaKnown RBP8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 HPS5Q9UPZ3 1129 aa8.67□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CHD4Q14839 1912 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZNF541Q9H0D2 1346 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 SCARF1Q14162 830 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 DACT2Q5SW24 774 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 B4GALNT3Q6L9W6 998 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CHD1LQ86WJ1 897 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 OTUD7AQ8TE49 926 aaPredicted RBP8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 GMLQ99445 158 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ADGRG1Q9Y653 693 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 SCN9AQ15858 1988 aa8.66□□□□□ -1.02
CHCHD3P1-201ENST00000425516 USP17L3A6NCW0 530 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 USP17L4A6NCW7 530 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 PSMD14O00487 310 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 RAD17O75943 681 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 IFIT2P09913 472 aaKnown RBP8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 MCAMP43121 646 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 GTF2IP78347 998 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 RASGRF1Q13972 1273 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 STRIP1Q5VSL9 837 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 TTLL5Q6EMB2 1281 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CIAPIN1Q6FI81 312 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CENPQQ7L2Z9 268 aaPredicted RBP8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 USP17L1Q7RTZ2 530 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 LRCH3Q96II8 777 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 CCDC136Q96JN2 1154 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 LNPKQ9C0E8 428 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 HMG20BQ9P0W2 317 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 STAP2Q9UGK3 403 aa8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 ZNF646O15015 1829 aaPredicted RBP8.65□□□□□ -1.02
CHCHD3P1-201ENST00000425516 COL1A1P02452 1464 aaPredicted RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PDS5AQ29RF7 1337 aaKnown RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 GLTPD2A6NH11 291 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 POTECB2RU33 542 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 DDNO94850 711 aaPredicted RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 UQCRFS1P1P0C7P4 283 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 ATP5JP18859 108 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 EIF6P56537 245 aaKnown RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 FKBP1AP62942 108 aaKnown RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 TNIP1Q15025 636 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 GRIK5Q16478 980 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 CCDC158Q5M9N0 1113 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 SWT1Q5T5J6 900 aaKnown RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 GORABQ5T7V8 394 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 RSBN1LQ6PCB5 846 aaPredicted RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PI16Q6UXB8 463 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 VPS37DQ86XT2 251 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 GPC2Q8N158 579 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 CERS5Q8N5B7 392 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PI4K2BQ8TCG2 481 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 MXD3Q9BW11 206 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 OSBPL3Q9H4L5 887 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 GNL3LQ9NVN8 582 aaKnown RBP8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 DENND2AQ9ULE3 1009 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PSME4Q14997 1843 aa8.64□□□□□ -1.03
CHCHD3P1-201ENST00000425516 TIAM2Q8IVF5 1701 aa8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 SALL1Q9NSC2 1324 aa8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 CYP2E1P05181 493 aaPredicted RBP8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PDE1AP54750 535 aa8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 TTC39AQ5SRH9 613 aa8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 PLEKHM2Q8IWE5 1019 aa8.63□□□□□ -1.03
CHCHD3P1-201ENST00000425516 SPATA5Q8NB90 893 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms