RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 PDE3AQ14432 1141 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 DIEXFQ68CQ4 756 aaKnown RBP6.57□□□□□ -1.36
HDAC9-209ENST00000425071 SLC51AQ86UW1 340 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 C12orf50Q8NA57 414 aaPredicted RBP6.57□□□□□ -1.36
HDAC9-209ENST00000425071 TPSG1Q9NRR2 321 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 CACNA2D2Q9NY47 1150 aa6.57□□□□□ -1.36
HDAC9-209ENST00000425071 DHX15O43143 795 aaKnown RBP6.56□□□□□ -1.36
HDAC9-209ENST00000425071 AOC2O75106 756 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 FBXO24O75426 580 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 KIF4BQ2VIQ3 1234 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 MEI1Q5TIA1 1274 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 PCNX4Q63HM2 1172 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 LLGL2Q6P1M3 1020 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 KCNB2Q92953 911 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 TP53INP1Q96A56 240 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 UBL7Q96S82 380 aaPredicted RBP6.56□□□□□ -1.36
HDAC9-209ENST00000425071 CBX8Q9HC52 389 aa6.56□□□□□ -1.36
HDAC9-209ENST00000425071 GAS2O43903 313 aaKnown RBP6.55□□□□□ -1.36
HDAC9-209ENST00000425071 CTSBP07858 339 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 CELA3AP09093 270 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 TTBK2Q6IQ55 1244 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
HDAC9-209ENST00000425071 UTP4Q969X6 686 aaKnown RBP6.55□□□□□ -1.36
HDAC9-209ENST00000425071 MYRFLQ96LU7 910 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 RSRP1Q9BUV0 290 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 WDR18Q9BV38 432 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 YIPF2Q9BWQ6 316 aa6.55□□□□□ -1.36
HDAC9-209ENST00000425071 CCDC86Q9H6F5 360 aaKnown RBP6.55□□□□□ -1.36
HDAC9-209ENST00000425071 PAGE1O75459 146 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 ECEL1O95672 775 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 ADH5P11766 374 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 LMNB1P20700 586 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 PREPP48147 710 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 DOC2BQ14184 412 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 NKAPLQ5M9Q1 402 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 MAP1SQ66K74 1059 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-209ENST00000425071 AGMOQ6ZNB7 445 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 STK35Q8TDR2 534 aa6.54□□□□□ -1.36
HDAC9-209ENST00000425071 GSX1Q9H4S2 264 aaPredicted RBP6.54□□□□□ -1.36
HDAC9-209ENST00000425071 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-209ENST00000425071 PRR23CQ6ZRP0 262 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 CCDC84Q86UT8 332 aaPredicted RBP6.53□□□□□ -1.36
HDAC9-209ENST00000425071 CLEC10AQ8IUN9 316 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 RELL1Q8IUW5 271 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 ARMC10Q8N2F6 343 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 ACSBG1Q96GR2 724 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 ATXN3LQ9H3M9 355 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 METTL5Q9NRN9 209 aaKnown RBP6.53□□□□□ -1.36
HDAC9-209ENST00000425071 RAXQ9Y2V3 346 aa6.53□□□□□ -1.36
HDAC9-209ENST00000425071 GSC2O15499 205 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 ZNF862O60290 1169 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 LIG1P18858 919 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 LIG3P49916 1009 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 USP11P51784 963 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 ERVK-24P63145 666 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 ID3Q02535 119 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 RSPO4Q2I0M5 234 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-209ENST00000425071 AKAP4Q5JQC9 854 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 FAM20CQ8IXL6 584 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 TMEM87AQ8NBN3 555 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 C2CD4AQ8NCU7 369 aaPredicted RBP6.52□□□□□ -1.37
HDAC9-209ENST00000425071 GPBAR1Q8TDU6 330 aa6.52□□□□□ -1.37
HDAC9-209ENST00000425071 ZC3H12CQ9C0D7 883 aaKnown RBP6.52□□□□□ -1.37
HDAC9-209ENST00000425071 CCDC180Q9P1Z9 1646 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 BMP3P12645 472 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
HDAC9-209ENST00000425071 HS2ST1Q7LGA3 356 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 FAM83CQ9BQN1 747 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 BACH2Q9BYV9 841 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 CRIM1Q9NZV1 1036 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 STOML1Q9UBI4 398 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 AP4E1Q9UPM8 1137 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 PCDHGC5Q9Y5F6 944 aa6.51□□□□□ -1.37
HDAC9-209ENST00000425071 TMPRSS2O15393 492 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 DYRK3O43781 588 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 DRD2P14416 443 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 MAP7Q14244 749 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 DYMQ7RTS9 669 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 TRIM42Q8IWZ5 723 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 GRIN3AQ8TCU5 1115 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 EZH1Q92800 747 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-209ENST00000425071 MRRFQ96E11 262 aaKnown RBP6.5□□□□□ -1.37
HDAC9-209ENST00000425071 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
HDAC9-209ENST00000425071 MIR1-1HGQ9H1L0 117 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 TACC3Q9Y6A5 838 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 SNCAIPQ9Y6H5 919 aa6.5□□□□□ -1.37
HDAC9-209ENST00000425071 SCAMP3O14828 347 aaKnown RBP6.49□□□□□ -1.37
HDAC9-209ENST00000425071 MAP4P27816 1152 aaKnown RBP6.49□□□□□ -1.37
HDAC9-209ENST00000425071 ASPAP45381 313 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 LMNB2Q03252 620 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 BEND4Q6ZU67 534 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 ERMP1Q7Z2K6 904 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 PHC3Q8NDX5 983 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 TMEM74Q96NL1 305 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 PIDD1Q9HB75 910 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 PPP1R9AQ9ULJ8 1098 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 PCDHA4Q9UN74 947 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 ACTL7BQ9Y614 415 aa6.49□□□□□ -1.37
HDAC9-209ENST00000425071 FAM95CA0A1B0GW59 222 aa6.48□□□□□ -1.37
HDAC9-209ENST00000425071 K7ELQ4 463 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms