RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 TMED8Q6PL24 325 aaPredicted RBP17.8■□□□□ 0.44
CALD1-206ENST00000424922 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
CALD1-206ENST00000424922 TM6SF1Q9BZW5 370 aa17.8■□□□□ 0.44
CALD1-206ENST00000424922 KCNQ5Q9NR82 932 aa17.8■□□□□ 0.44
CALD1-206ENST00000424922 AATFQ9NY61 560 aaKnown RBP eCLIP17.8■□□□□ 0.44
CALD1-206ENST00000424922 RPAP1Q9BWH6 1393 aaPredicted RBP17.79■□□□□ 0.44
CALD1-206ENST00000424922 GSG1L2A8MUP6 293 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 IGSF3O75054 1194 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 PSMA5P28066 241 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 HAND2P61296 217 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 SOGA3Q5TF21 947 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 TMX3Q96JJ7 454 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 PSMD1Q99460 953 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 ZSWIM6Q9HCJ5 1215 aa17.79■□□□□ 0.44
CALD1-206ENST00000424922 CDK5RAP2Q96SN8 1893 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 GSTO1P78417 241 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 KRT32Q14532 448 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 IMMTQ16891 758 aaKnown RBP17.78■□□□□ 0.44
CALD1-206ENST00000424922 IFNL3Q8IZI9 196 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 MXD3Q9BW11 206 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 EPB41L4AQ9HCS5 686 aaPredicted RBP17.78■□□□□ 0.44
CALD1-206ENST00000424922 CYP46A1Q9Y6A2 500 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 COL9A3Q14050 684 aaPredicted RBP17.78■□□□□ 0.44
CALD1-206ENST00000424922 RUFY3Q7L099 469 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 PSME4Q14997 1843 aa17.78■□□□□ 0.44
CALD1-206ENST00000424922 STOX1Q6ZVD7 989 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 CERS5Q8N5B7 392 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 NLGN2Q8NFZ4 835 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 SDR42E1Q8WUS8 393 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 NAPBQ9H115 298 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 ZNF277Q9NRM2 450 aaPredicted RBP17.77■□□□□ 0.44
CALD1-206ENST00000424922 BRPF3Q9ULD4 1205 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 ARFGEF1Q9Y6D6 1849 aa17.77■□□□□ 0.44
CALD1-206ENST00000424922 ZNF213O14771 459 aa17.77■□□□□ 0.43
CALD1-206ENST00000424922 ALX1Q15699 326 aa17.77■□□□□ 0.43
CALD1-206ENST00000424922 BLOC1S2Q6QNY1 142 aa17.77■□□□□ 0.43
CALD1-206ENST00000424922 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.43
CALD1-206ENST00000424922 NACAP1Q9BZK3 213 aa17.77■□□□□ 0.43
CALD1-206ENST00000424922 BCS1LQ9Y276 419 aa17.77■□□□□ 0.43
CALD1-206ENST00000424922 E7EWF7 191 aa17.76■□□□□ 0.43
CALD1-206ENST00000424922 F8W031 263 aaPredicted RBP17.76■□□□□ 0.43
CALD1-206ENST00000424922 LDHCP07864 332 aa17.76■□□□□ 0.43
CALD1-206ENST00000424922 TDO2P48775 406 aa17.76■□□□□ 0.43
CALD1-206ENST00000424922 TTC14Q96N46 770 aa17.76■□□□□ 0.43
CALD1-206ENST00000424922 NEK1Q96PY6 1258 aa17.76■□□□□ 0.43
CALD1-206ENST00000424922 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
CALD1-206ENST00000424922 GZF1Q9H116 711 aaPredicted RBP17.75■□□□□ 0.43
CALD1-206ENST00000424922 MROH7-TTC4A0A0A0MT08 1334 aa17.75■□□□□ 0.43
CALD1-206ENST00000424922 ZMYM6O95789 1325 aa17.75■□□□□ 0.43
CALD1-206ENST00000424922 STRIP1Q5VSL9 837 aa17.75■□□□□ 0.43
CALD1-206ENST00000424922 LARGE2Q8N3Y3 721 aa17.75■□□□□ 0.43
CALD1-206ENST00000424922 ADAMTSL1Q8N6G6 1762 aa17.75■□□□□ 0.43
CALD1-206ENST00000424922 SUGT1Q9Y2Z0 365 aa17.75■□□□□ 0.43
CALD1-206ENST00000424922 RPS6KB1P23443 525 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 AK2P54819 239 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 TCEANC2Q96MN5 208 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 NOL10Q9BSC4 688 aaKnown RBP17.74■□□□□ 0.43
CALD1-206ENST00000424922 CRNKL1Q9BZJ0 848 aaKnown RBP17.74■□□□□ 0.43
CALD1-206ENST00000424922 TTF2Q9UNY4 1162 aaKnown RBP17.74■□□□□ 0.43
CALD1-206ENST00000424922 COL4A5P29400 1685 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 USP17L3A6NCW0 530 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 USP17L4A6NCW7 530 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 YDJCA8MPS7 323 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 BAG3O95817 575 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 MRE11P49959 708 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 KLHL40Q2TBA0 621 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 USP17L1Q7RTZ2 530 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 SLF2Q8IX21 1173 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 NBPF3Q9H094 633 aa17.74■□□□□ 0.43
CALD1-206ENST00000424922 DACT2Q5SW24 774 aa17.73■□□□□ 0.43
CALD1-206ENST00000424922 BTDP43251 543 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 SH3RF3Q8TEJ3 882 aaPredicted RBP17.72■□□□□ 0.43
CALD1-206ENST00000424922 LARP6Q9BRS8 491 aaKnown RBP17.72■□□□□ 0.43
CALD1-206ENST00000424922 VPS33BQ9H267 617 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 TAOK3Q9H2K8 898 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 ZDHHC9Q9Y397 364 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 LAMB1P07942 1786 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 NAV1Q8NEY1 1877 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 FOCADQ5VW36 1801 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 GPR75-ASB3A0A0A6YYF3 556 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 SCNN1DP51172 638 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 PPP4CP60510 307 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 TBC1D10CQ8IV04 446 aa17.72■□□□□ 0.43
CALD1-206ENST00000424922 FAM163AQ96GL9 167 aaPredicted RBP17.72■□□□□ 0.43
CALD1-206ENST00000424922 ECM29Q5VYK3 1845 aa17.71■□□□□ 0.43
CALD1-206ENST00000424922 GAKO14976 1311 aa17.71■□□□□ 0.43
CALD1-206ENST00000424922 HMGB1P09429 215 aaKnown RBP17.71■□□□□ 0.43
CALD1-206ENST00000424922 XRCC6P12956 609 aaKnown RBP eCLIP17.71■□□□□ 0.43
CALD1-206ENST00000424922 IARSP41252 1262 aaKnown RBP17.71■□□□□ 0.43
CALD1-206ENST00000424922 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
CALD1-206ENST00000424922 MYH1P12882 1939 aa17.71■□□□□ 0.43
CALD1-206ENST00000424922 FKBP1AP62942 108 aaKnown RBP17.71■□□□□ 0.42
CALD1-206ENST00000424922 PKP1Q13835 747 aa17.71■□□□□ 0.42
CALD1-206ENST00000424922 KIAA0825Q8IV33 1275 aa17.71■□□□□ 0.42
CALD1-206ENST00000424922 FHDC1Q9C0D6 1143 aaPredicted RBP17.71■□□□□ 0.42
CALD1-206ENST00000424922 DCP1AQ9NPI6 582 aaPredicted RBP17.71■□□□□ 0.42
CALD1-206ENST00000424922 ATP8A2Q9NTI2 1148 aa17.71■□□□□ 0.42
CALD1-206ENST00000424922 DAGLAQ9Y4D2 1042 aa17.71■□□□□ 0.42
CALD1-206ENST00000424922 TIAM2Q8IVF5 1701 aa17.7■□□□□ 0.42
CALD1-206ENST00000424922 UTRNP46939 3433 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms