RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 GTF2A2P52657 109 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 NFIAQ12857 509 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 ATP2B3Q16720 1220 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 FAM151AQ8WW52 585 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 FRAT1Q92837 279 aaPredicted RBP16.17■□□□□ 0.18
VRK3-203ENST00000424804 OTUD5Q96G74 571 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 ERO1AQ96HE7 468 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 COPRSQ9NQ92 184 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 FAM198AQ9UFP1 575 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 RBBP6Q7Z6E9 1792 aaKnown RBP16.17■□□□□ 0.18
VRK3-203ENST00000424804 MAST3O60307 1309 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 ZBED9Q6R2W3 1325 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 SALL1Q9NSC2 1324 aa16.17■□□□□ 0.18
VRK3-203ENST00000424804 IRF6O14896 467 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 ADORA1P30542 326 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 INPP5BP32019 993 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 INTS3Q68E01 1043 aaKnown RBP16.16■□□□□ 0.18
VRK3-203ENST00000424804 MIGA2Q7L4E1 593 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 ERO1BQ86YB8 467 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 ZFPM1Q8IX07 1006 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 ARMC5Q96C12 935 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 WRNIP1Q96S55 665 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 CEP126Q9P2H0 1117 aa16.16■□□□□ 0.18
VRK3-203ENST00000424804 BTBD19C9JJ37 291 aa16.15■□□□□ 0.18
VRK3-203ENST00000424804 IL15P40933 162 aaPredicted RBP16.15■□□□□ 0.18
VRK3-203ENST00000424804 MOGSQ13724 837 aa16.15■□□□□ 0.18
VRK3-203ENST00000424804 API5Q9BZZ5 524 aaKnown RBP16.15■□□□□ 0.18
VRK3-203ENST00000424804 EFCC1Q9HA90 598 aa16.15■□□□□ 0.18
VRK3-203ENST00000424804 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
VRK3-203ENST00000424804 CSADQ9Y600 493 aa16.15■□□□□ 0.18
VRK3-203ENST00000424804 MYH2Q9UKX2 1941 aa16.15■□□□□ 0.18
VRK3-203ENST00000424804 ATRNL1Q5VV63 1379 aa16.14■□□□□ 0.17
VRK3-203ENST00000424804 BCAR3O75815 825 aa16.14■□□□□ 0.17
VRK3-203ENST00000424804 TIMM10P62072 90 aa16.14■□□□□ 0.17
VRK3-203ENST00000424804 PPIL2Q13356 520 aa16.14■□□□□ 0.17
VRK3-203ENST00000424804 TAF1CQ15572 869 aaPredicted RBP16.14■□□□□ 0.17
VRK3-203ENST00000424804 CCDC102BQ68D86 513 aa16.14■□□□□ 0.17
VRK3-203ENST00000424804 ARHGAP45Q92619 1136 aa16.14■□□□□ 0.17
VRK3-203ENST00000424804 AK9Q5TCS8 1911 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 TCP10Q12799 353 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 MTX1Q13505 466 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 PRPF38BQ5VTL8 546 aaKnown RBP16.13■□□□□ 0.17
VRK3-203ENST00000424804 SH3BP5LQ7L8J4 393 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 ZNF341Q9BYN7 854 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 ARHGAP39Q9C0H5 1083 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 ZFYVE28Q9HCC9 887 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 TMOD2Q9NZR1 351 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 RFX7Q2KHR2 1363 aa16.13■□□□□ 0.17
VRK3-203ENST00000424804 SEMA3EO15041 775 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 TLR2O60603 784 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 SLURP2P0DP57 97 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 CETPP11597 493 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 CTGFP29279 349 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 PPATQ06203 517 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 ZCCHC17Q9NP64 241 aaKnown RBP16.12■□□□□ 0.17
VRK3-203ENST00000424804 USP40Q9NVE5 1235 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 DENND2AQ9ULE3 1009 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 KCNH4Q9UQ05 1017 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 GAKO14976 1311 aa16.12■□□□□ 0.17
VRK3-203ENST00000424804 PHF20L1A8MW92 1017 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 LDHBP07195 334 aaKnown RBP16.11■□□□□ 0.17
VRK3-203ENST00000424804 MAP3K10Q02779 954 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 SNAPC2Q13487 334 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 RASGRF1Q13972 1273 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 NOL9Q5SY16 702 aaKnown RBP16.11■□□□□ 0.17
VRK3-203ENST00000424804 DCAF15Q66K64 600 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 C17orf99Q6UX52 265 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 HOOK2Q96ED9 719 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 FAM163AQ96GL9 167 aaPredicted RBP16.11■□□□□ 0.17
VRK3-203ENST00000424804 IDI2Q9BXS1 227 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 PTCH2Q9Y6C5 1203 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
VRK3-203ENST00000424804 IPO8O15397 1037 aaKnown RBP16.1■□□□□ 0.17
VRK3-203ENST00000424804 EN2P19622 333 aaPredicted RBP16.1■□□□□ 0.17
VRK3-203ENST00000424804 TFCP2Q12800 502 aa16.1■□□□□ 0.17
VRK3-203ENST00000424804 ZNF333Q96JL9 665 aa16.1■□□□□ 0.17
VRK3-203ENST00000424804 DDX4Q9NQI0 724 aaKnown RBP16.1■□□□□ 0.17
VRK3-203ENST00000424804 GNL3LQ9NVN8 582 aaKnown RBP16.1■□□□□ 0.17
VRK3-203ENST00000424804 PDS5AQ29RF7 1337 aaKnown RBP16.1■□□□□ 0.17
VRK3-203ENST00000424804 WDHD1O75717 1129 aaPredicted RBP16.09■□□□□ 0.17
VRK3-203ENST00000424804 TRIM27P14373 513 aa16.09■□□□□ 0.17
VRK3-203ENST00000424804 LACTBP83111 547 aaPredicted RBP16.09■□□□□ 0.17
VRK3-203ENST00000424804 GPAT2Q6NUI2 795 aa16.09■□□□□ 0.17
VRK3-203ENST00000424804 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.09■□□□□ 0.17
VRK3-203ENST00000424804 XAGE2Q96GT9 111 aa16.09■□□□□ 0.17
VRK3-203ENST00000424804 PHIPQ8WWQ0 1821 aa16.09■□□□□ 0.17
VRK3-203ENST00000424804 DOCK2Q92608 1830 aa16.08■□□□□ 0.17
VRK3-203ENST00000424804 A0A1B0GUL7 405 aa16.08■□□□□ 0.16
VRK3-203ENST00000424804 DDTLA6NHG4 134 aaPredicted RBP16.08■□□□□ 0.16
VRK3-203ENST00000424804 RGS3P49796 1198 aa16.08■□□□□ 0.16
VRK3-203ENST00000424804 RHBDL3P58872 404 aa16.08■□□□□ 0.16
VRK3-203ENST00000424804 ANKRD23Q86SG2 305 aa16.08■□□□□ 0.16
VRK3-203ENST00000424804 HDAC5Q9UQL6 1122 aa16.08■□□□□ 0.16
VRK3-203ENST00000424804 PNMA6EA0A0J9YXQ4 647 aa16.07■□□□□ 0.16
VRK3-203ENST00000424804 SRGAP3O43295 1099 aa16.07■□□□□ 0.16
VRK3-203ENST00000424804 ENTPD3O75355 529 aa16.07■□□□□ 0.16
VRK3-203ENST00000424804 GNAI3P08754 354 aa16.07■□□□□ 0.16
VRK3-203ENST00000424804 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms