RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 TNS2Q63HR2 1409 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 SH2B2O14492 632 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-204ENST00000424143 STX10O60499 249 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 TTF1Q15361 905 aaPredicted RBP17.53■□□□□ 0.4
C9orf3-204ENST00000424143 UBE3CQ15386 1083 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 SHC4Q6S5L8 630 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 KRBA2Q6ZNG9 492 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 CHST3Q7LGC8 479 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 ALG1Q9BT22 464 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 CALCOCO1Q9P1Z2 691 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 DACH1Q9UI36 760 aa17.53■□□□□ 0.4
C9orf3-204ENST00000424143 MROH7-TTC4A0A0A0MT08 1334 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 PNMA6AP0CW24 399 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-204ENST00000424143 TOP1P11387 765 aaKnown RBP17.52■□□□□ 0.4
C9orf3-204ENST00000424143 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 ARHGAP29Q52LW3 1261 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 KRT40Q6A162 431 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 OTUD7BQ6GQQ9 843 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 TMCO3Q6UWJ1 677 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 VPS37DQ86XT2 251 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 HOMER1Q86YM7 354 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 TMEM139Q8IV31 216 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 ZNF579Q8NAF0 562 aaKnown RBP17.52■□□□□ 0.4
C9orf3-204ENST00000424143 MLKLQ8NB16 471 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 WASF1Q92558 559 aa17.52■□□□□ 0.4
C9orf3-204ENST00000424143 GPHNQ9NQX3 736 aaPredicted RBP17.52■□□□□ 0.4
C9orf3-204ENST00000424143 GPAA1O43292 621 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 PCCAP05165 728 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-204ENST00000424143 LMOD1P29536 600 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-204ENST00000424143 LIFRP42702 1097 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 RCAN1P53805 252 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 MDM2Q00987 491 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-204ENST00000424143 TUBB2AQ13885 445 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 WASHC4Q2M389 1173 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 JAKMIP3Q5VZ66 844 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 TTLL7Q6ZT98 887 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 GPR161Q8N6U8 529 aaKnown RBP17.51■□□□□ 0.39
C9orf3-204ENST00000424143 ENOX1Q8TC92 643 aaKnown RBP17.51■□□□□ 0.39
C9orf3-204ENST00000424143 ERCC4Q92889 916 aaPredicted RBP17.51■□□□□ 0.39
C9orf3-204ENST00000424143 TUBB2BQ9BVA1 445 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 AKAP11Q9UKA4 1901 aa17.51■□□□□ 0.39
C9orf3-204ENST00000424143 SERPINC1P01008 464 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 CYP2C19P33261 490 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 ADD2P35612 726 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 METAP2P50579 478 aaKnown RBP eCLIP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 MAP3K9P80192 1104 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 TCIRG1Q13488 830 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 NTRK3Q16288 839 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 GORABQ5T7V8 394 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 KANK3Q6NY19 840 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 MSL3Q8N5Y2 521 aaKnown RBP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 PARP3Q9Y6F1 533 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 CDHR2Q9BYE9 1310 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 BIN1O00499 593 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 ZNF18P17022 549 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 FKBP4Q02790 459 aaKnown RBP eCLIP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 MNS1Q8NEH6 495 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
C9orf3-204ENST00000424143 LRP6O75581 1613 aa17.5■□□□□ 0.39
C9orf3-204ENST00000424143 WDR17Q8IZU2 1322 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 ATP1A3P13637 1013 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 PLA2G4AP47712 749 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 SARSP49591 514 aaKnown RBP17.49■□□□□ 0.39
C9orf3-204ENST00000424143 TEX35Q5T0J7 233 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 APOA5Q6Q788 366 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 METTL16Q86W50 562 aaKnown RBP17.49■□□□□ 0.39
C9orf3-204ENST00000424143 KRI1Q8N9T8 703 aaKnown RBP17.49■□□□□ 0.39
C9orf3-204ENST00000424143 PUS3Q9BZE2 481 aaKnown RBP17.49■□□□□ 0.39
C9orf3-204ENST00000424143 PUS7LQ9H0K6 701 aaKnown RBP17.49■□□□□ 0.39
C9orf3-204ENST00000424143 KCNH3Q9ULD8 1083 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 PPP2R2CQ9Y2T4 447 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 ECM29Q5VYK3 1845 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 PCDH11XQ9BZA7 1347 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 PCDH11YQ9BZA8 1340 aa17.49■□□□□ 0.39
C9orf3-204ENST00000424143 TRIM29Q14134 588 aa17.48■□□□□ 0.39
C9orf3-204ENST00000424143 CFAP100Q494V2 611 aa17.48■□□□□ 0.39
C9orf3-204ENST00000424143 RSRC2Q7L4I2 434 aaKnown RBP17.48■□□□□ 0.39
C9orf3-204ENST00000424143 IGDCC4Q8TDY8 1250 aa17.48■□□□□ 0.39
C9orf3-204ENST00000424143 RABGGTAQ92696 567 aa17.48■□□□□ 0.39
C9orf3-204ENST00000424143 ZNF594Q96JF6 807 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-204ENST00000424143 NBPF3Q9H094 633 aa17.48■□□□□ 0.39
C9orf3-204ENST00000424143 VWA3AA6NCI4 1184 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 ERCC5P28715 1186 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 IARSP41252 1262 aaKnown RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 ZAP70P43403 619 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 PIP4K2AP48426 406 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 HAND2P61296 217 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 CNNM3Q8NE01 707 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 DPF2Q92785 391 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 TIAM2Q8IVF5 1701 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 ZBTB43O43298 467 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 FMNL1O95466 1100 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-204ENST00000424143 CSB-PGBD3P0DP91 1061 aa17.47■□□□□ 0.39
C9orf3-204ENST00000424143 IFNAR1P17181 557 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms