RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 TBC1D5Q92609 795 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 SP4Q02446 784 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 WTAPQ15007 396 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 KLHDC4Q8TBB5 520 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 ERO1AQ96HE7 468 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 CABS1Q96KC9 395 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 ZBTB21Q9ULJ3 1066 aa12.47□□□□□ -0.41
TNC-203ENST00000423613 CALM1P0DP23 149 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 CALM2P0DP24 149 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 CALM3P0DP25 149 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 AKNAD1Q5T1N1 836 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 CHPF2Q9P2E5 772 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 LRRD1A4D1F6 860 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 PCDHB15Q9Y5E8 787 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 RBM8AQ9Y5S9 174 aaKnown RBP12.46□□□□□ -0.41
TNC-203ENST00000423613 SNRPA1P09661 255 aaKnown RBP12.46□□□□□ -0.41
TNC-203ENST00000423613 LIG3P49916 1009 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 PDE1AP54750 535 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 ERCC6LQ2NKX8 1250 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 ESYT1Q9BSJ8 1104 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 ALG1Q9BT22 464 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 PLVAPQ9BX97 442 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 TRIM35Q9UPQ4 493 aa12.46□□□□□ -0.41
TNC-203ENST00000423613 UQCRFS1P1P0C7P4 283 aa12.46□□□□□ -0.42
TNC-203ENST00000423613 ZNF804AQ7Z570 1209 aa12.46□□□□□ -0.42
TNC-203ENST00000423613 RMND1Q9NWS8 449 aa12.46□□□□□ -0.42
TNC-203ENST00000423613 RPRD2Q5VT52 1461 aaKnown RBP12.45□□□□□ -0.42
TNC-203ENST00000423613 GIGYF1O75420 1035 aaPredicted RBP12.45□□□□□ -0.42
TNC-203ENST00000423613 ANKRD13DQ6ZTN6 518 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 NEK11Q8NG66 645 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 STAG1Q8WVM7 1258 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 ARHGAP45Q92619 1136 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 C14orf93Q9H972 538 aaKnown RBP12.45□□□□□ -0.42
TNC-203ENST00000423613 ACEP12821 1306 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 MSH6P52701 1360 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 ZBTB43O43298 467 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 INPP1P49441 399 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 RASEFQ8IZ41 740 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 ERMNQ8TAM6 284 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
TNC-203ENST00000423613 CCDC65Q8IXS2 484 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 PROCA1Q8NCQ7 364 aaPredicted RBP12.45□□□□□ -0.42
TNC-203ENST00000423613 CTAGE1Q96RT6 745 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 SNCBQ16143 134 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 LRRC27Q9C0I9 530 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 LPXNO60711 386 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 BAG2O95816 211 aa12.45□□□□□ -0.42
TNC-203ENST00000423613 EEF2P13639 858 aaKnown RBP12.45□□□□□ -0.42
TNC-203ENST00000423613 ATP5DP30049 168 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 HEATR3Q7Z4Q2 680 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 KRT86O43790 486 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 TUBB4AP04350 444 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 Q6ZUG5 572 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 KCNG4Q8TDN1 519 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 MRPS27Q92552 414 aaKnown RBP12.44□□□□□ -0.42
TNC-203ENST00000423613 KRT23Q9C075 422 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 SH3BGRP55822 239 aaPredicted RBP12.44□□□□□ -0.42
TNC-203ENST00000423613 IRX5P78411 483 aaPredicted RBP12.44□□□□□ -0.42
TNC-203ENST00000423613 NLRP3Q96P20 1036 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 LUC7L3O95232 432 aaKnown RBP12.44□□□□□ -0.42
TNC-203ENST00000423613 STAT6P42226 847 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 CRCPO75575 148 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 CYP7A1P22680 504 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 KRT83P78385 493 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 PLCB3Q01970 1234 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 MAP3K1Q13233 1512 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 TRPC3Q13507 836 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 SPOUT1Q5T280 376 aaKnown RBP12.44□□□□□ -0.42
TNC-203ENST00000423613 CNPY4Q8N129 248 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 FAM200AQ8TCP9 573 aa12.44□□□□□ -0.42
TNC-203ENST00000423613 GEN1Q17RS7 908 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 RAB3IPQ96QF0 476 aaPredicted RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 TXNDC16Q9P2K2 825 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 PPP1R9AQ9ULJ8 1098 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 NBPF7P0C2Y1 421 aaPredicted RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 MARCKSP29966 332 aaPredicted RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 POLE2P56282 527 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 TUBB4BP68371 445 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 DDB1Q16531 1140 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 ANKRD44Q8N8A2 993 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 SIRT1Q96EB6 747 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 SLC4A4Q9Y6R1 1079 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 F13A1P00488 732 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 RTN1Q16799 776 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 IFIT1BQ5T764 474 aaKnown RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 ARHGAP24Q8N264 748 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 SLC24A3Q9HC58 644 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 NIP7Q9Y221 180 aaKnown RBP eCLIP12.43□□□□□ -0.42
TNC-203ENST00000423613 RNF8O76064 485 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 DNM1Q05193 864 aaKnown RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 MCMDC2Q4G0Z9 681 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 ZGPATQ8N5A5 531 aaKnown RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 MRPL50Q8N5N7 158 aaKnown RBP12.43□□□□□ -0.42
TNC-203ENST00000423613 XAGE3Q8WTP9 111 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 RALGAPBQ86X10 1494 aa12.43□□□□□ -0.42
TNC-203ENST00000423613 C17orf53Q8N3J3 647 aaPredicted RBP12.42□□□□□ -0.42
TNC-203ENST00000423613 ANLNQ9NQW6 1124 aa12.42□□□□□ -0.42
TNC-203ENST00000423613 STK32BQ9NY57 414 aa12.42□□□□□ -0.42
TNC-203ENST00000423613 TNNC1P63316 161 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms