RNA–Protein interactions for RNA: ENST00000422687.1

CDC42EP3-202, Transcript of CDC42 effector protein 3, humanhuman

TSL 4

Gene CDC42EP3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-202ENST00000422687 PLCB3Q01970 1234 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 ZNF827Q17R98 1081 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 SLC27A3Q5K4L6 730 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 NBPF10Q6P3W6 841 aaKnown RBP6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 BCL11AQ9H165 835 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 LRRC4BQ9NT99 713 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 POLIQ9UNA4 740 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 ZNF232Q9UNY5 417 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 HCN4Q9Y3Q4 1203 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 NHSQ6T4R5 1651 aa6.58□□□□□ -1.36
CDC42EP3-202ENST00000422687 AKAP12Q02952 1782 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 EVC2Q86UK5 1308 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 COL24A1Q17RW2 1714 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 PDGFAP04085 211 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 LDHBP07195 334 aaKnown RBP6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 RHOQP17081 205 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 ZAP70P43403 619 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 ENOX2Q16206 610 aaKnown RBP6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 SV2AQ7L0J3 742 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 IFT43Q96FT9 208 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 CUEDC1Q9NWM3 386 aaPredicted RBP6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 KLK14Q9P0G3 267 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 BCS1LQ9Y276 419 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 PARP3Q9Y6F1 533 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 QRICH2Q9H0J4 1663 aa6.57□□□□□ -1.36
CDC42EP3-202ENST00000422687 TXLNAP40222 546 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 AAMPQ13685 434 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 TMC4Q7Z404 712 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 VWA5B2Q8N398 1253 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 EDEM1Q92611 657 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 BACH2Q9BYV9 841 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 ZDHHC3Q9NYG2 299 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 PARP2Q9UGN5 583 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 CHD4Q14839 1912 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 SBNO2Q9Y2G9 1366 aa6.56□□□□□ -1.36
CDC42EP3-202ENST00000422687 USP54Q70EL1 1684 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 IL2RBP14784 551 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 MAPK8P45983 427 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 DAB2P98082 770 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 POU4F2Q12837 409 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 TSNAXIP1Q2TAA8 658 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 C4orf17Q53FE4 359 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 IER5Q5VY09 327 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 TMEM214Q6NUQ4 689 aaKnown RBP6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 TRIM22Q8IYM9 498 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 TMC1Q8TDI8 760 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 ZNF837Q96EG3 531 aaPredicted RBP6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 ACSBG1Q96GR2 724 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 DUSP9Q99956 384 aaKnown RBP6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 CFHR5Q9BXR6 569 aa6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 COL25A1Q9BXS0 654 aaPredicted RBP6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 DMGDHQ9UI17 866 aaKnown RBP6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 GPC6Q9Y625 555 aaPredicted RBP6.55□□□□□ -1.36
CDC42EP3-202ENST00000422687 CD163L1Q9NR16 1453 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 PNPLA7Q6ZV29 1317 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 QSER1Q2KHR3 1735 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 CDC14CA4D256 554 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 TGFBR3LH3BV60 316 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 SCAMP3O14828 347 aaKnown RBP6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 DNM1Q05193 864 aaKnown RBP6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 GPR162Q16538 588 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 GNASQ5JWF2 1037 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 RNFT1Q5M7Z0 435 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 TREML1Q86YW5 311 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 NIF3L1Q9GZT8 377 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 WWC3Q9ULE0 1092 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 KTN1Q86UP2 1357 aaKnown RBP6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 RGPD5Q99666 1765 aa6.54□□□□□ -1.36
CDC42EP3-202ENST00000422687 SHANK3Q9BYB0 1731 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 BTAF1O14981 1849 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 H7C1W4 665 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 SLURP2P0DP57 97 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 POLD1P28340 1107 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 ATP2B2Q01814 1243 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 HIF1AQ16665 826 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 ALG1LQ6GMV1 187 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 FBF1Q8TES7 1133 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 ANKRD24Q8TF21 1146 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 CNTNAP3BQ96NU0 1288 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 SETDB2Q96T68 719 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 CNTNAP3Q9BZ76 1288 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 RNF19AQ9NV58 838 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 NLRP2Q9NX02 1062 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 NSD2O96028 1365 aa6.53□□□□□ -1.36
CDC42EP3-202ENST00000422687 PNMA6FA0A0J9YX94 578 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 A0A1B0GTH6 734 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 YBX3P16989 372 aaKnown RBP eCLIP6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 PLA2G4AP47712 749 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 HDLBPQ00341 1268 aaKnown RBP6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 GAS6Q14393 721 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 NME9Q86XW9 330 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 NLGN2Q8NFZ4 835 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 IP6K1Q92551 441 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 KLRG1Q96E93 195 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 GGNBP2Q9H3C7 697 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 TIMMDC1Q9NPL8 285 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 MON2Q7Z3U7 1717 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 ANKRD36BQ8N2N9 1353 aa6.52□□□□□ -1.37
CDC42EP3-202ENST00000422687 EDC4Q6P2E9 1401 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms