RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 LRRFIP1Q32MZ4 808 aaKnown RBP10.72□□□□□ -0.69
HPS4-204ENST00000422379 ADCK5Q3MIX3 580 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 CREB3L3Q68CJ9 461 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 SPTY2D1Q68D10 685 aaPredicted RBP10.72□□□□□ -0.69
HPS4-204ENST00000422379 STOX1Q6ZVD7 989 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 SH3RF3Q8TEJ3 882 aaPredicted RBP10.72□□□□□ -0.69
HPS4-204ENST00000422379 AIDAQ96BJ3 306 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 IL17RAQ96F46 866 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 DSCC1Q9BVC3 393 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 VPS33BQ9H267 617 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 DAGLAQ9Y4D2 1042 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 TACC3Q9Y6A5 838 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 RHBDL3P58872 404 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 NIM1KQ8IY84 436 aa10.72□□□□□ -0.69
HPS4-204ENST00000422379 SLKQ9H2G2 1235 aaPredicted RBP10.72□□□□□ -0.69
HPS4-204ENST00000422379 ZNF541Q9H0D2 1346 aa10.71□□□□□ -0.69
HPS4-204ENST00000422379 CCDC88AQ3V6T2 1871 aa10.71□□□□□ -0.69
HPS4-204ENST00000422379 GPR75-ASB3A0A0A6YYF3 556 aa10.71□□□□□ -0.69
HPS4-204ENST00000422379 EPB41L2O43491 1005 aaKnown RBP10.71□□□□□ -0.69
HPS4-204ENST00000422379 CPA1P15085 419 aa10.71□□□□□ -0.69
HPS4-204ENST00000422379 BTDP43251 543 aa10.71□□□□□ -0.69
HPS4-204ENST00000422379 FKBP1AP62942 108 aaKnown RBP10.71□□□□□ -0.69
HPS4-204ENST00000422379 APOBEC3HQ6NTF7 200 aaKnown RBP10.71□□□□□ -0.69
HPS4-204ENST00000422379 RSBN1LQ6PCB5 846 aaPredicted RBP10.71□□□□□ -0.69
HPS4-204ENST00000422379 FAM163AQ96GL9 167 aaPredicted RBP10.71□□□□□ -0.69
HPS4-204ENST00000422379 SLC4A4Q9Y6R1 1079 aa10.71□□□□□ -0.69
HPS4-204ENST00000422379 MYH2Q9UKX2 1941 aa10.71□□□□□ -0.7
HPS4-204ENST00000422379 CYP2D7A0A087X1C5 515 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 FZD9O00144 591 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 PPP4CP60510 307 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 HAND2P61296 217 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 HSCBQ8IWL3 235 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 SNX21Q969T3 373 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 INCENPQ9NQS7 918 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 MKRN1Q9UHC7 482 aaKnown RBP10.7□□□□□ -0.7
HPS4-204ENST00000422379 SUGT1Q9Y2Z0 365 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 PATL2C9JE40 543 aaKnown RBP10.7□□□□□ -0.7
HPS4-204ENST00000422379 EGFRP00533 1210 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 CRKP46108 304 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 IFNL3Q8IZI9 196 aa10.7□□□□□ -0.7
HPS4-204ENST00000422379 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
HPS4-204ENST00000422379 U3KPZ7 1027 aaPredicted RBP10.7□□□□□ -0.7
HPS4-204ENST00000422379 RPAP1Q9BWH6 1393 aaPredicted RBP10.69□□□□□ -0.7
HPS4-204ENST00000422379 SBF1O95248 1867 aa10.69□□□□□ -0.7
HPS4-204ENST00000422379 CYP2D6P10635 497 aa10.69□□□□□ -0.7
HPS4-204ENST00000422379 NFKBIBQ15653 356 aa10.69□□□□□ -0.7
HPS4-204ENST00000422379 TBC1D10CQ8IV04 446 aa10.69□□□□□ -0.7
HPS4-204ENST00000422379 JDP2Q8WYK2 163 aa10.69□□□□□ -0.7
HPS4-204ENST00000422379 APPP05067 770 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 LMNB1P20700 586 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 GSTO1P78417 241 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 ALX1Q15699 326 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 CDC42EP5Q6NZY7 148 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 SPRYD3Q8NCJ5 442 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 ZDHHC15Q96MV8 337 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 DCP1AQ9NPI6 582 aaPredicted RBP10.68□□□□□ -0.7
HPS4-204ENST00000422379 DDX4Q9NQI0 724 aaKnown RBP10.68□□□□□ -0.7
HPS4-204ENST00000422379 WDHD1O75717 1129 aaPredicted RBP10.68□□□□□ -0.7
HPS4-204ENST00000422379 CACNB3P54284 484 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 ANAPC15P60006 121 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 PLCB2Q00722 1185 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 NFIAQ12857 509 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 SLC4A8Q2Y0W8 1093 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 HHIPL2Q6UWX4 724 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 TEKT1Q969V4 418 aa10.68□□□□□ -0.7
HPS4-204ENST00000422379 PRMT6Q96LA8 375 aaPredicted RBP10.68□□□□□ -0.7
HPS4-204ENST00000422379 CDK5RAP2Q96SN8 1893 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 BAZ2AQ9UIF9 1905 aaKnown RBP10.67□□□□□ -0.7
HPS4-204ENST00000422379 DDX60LQ5H9U9 1706 aaKnown RBP10.67□□□□□ -0.7
HPS4-204ENST00000422379 IGSF3O75054 1194 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 USP17L8P0C7I0 530 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 SLURP2P0DP57 97 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 GMPSP49915 693 aaPredicted RBP10.67□□□□□ -0.7
HPS4-204ENST00000422379 TSGA10IPQ3SY00 556 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 CTR9Q6PD62 1173 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 TMED8Q6PL24 325 aaPredicted RBP10.67□□□□□ -0.7
HPS4-204ENST00000422379 MAPKAPK5Q8IW41 473 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 TGFBRAP1Q8WUH2 860 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 TCEANC2Q96MN5 208 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 JAKMIP1Q96N16 626 aaKnown RBP10.67□□□□□ -0.7
HPS4-204ENST00000422379 SERPINA10Q9UK55 444 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 ZMYM6O95789 1325 aa10.67□□□□□ -0.7
HPS4-204ENST00000422379 E7EWF7 191 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 LDHCP07864 332 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 GNAT2P19087 354 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 CTDSPL2Q05D32 466 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 CFAP100Q494V2 611 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 MRIQ9BWK5 157 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 CRNKL1Q9BZJ0 848 aaKnown RBP10.66□□□□□ -0.7
HPS4-204ENST00000422379 RNF181Q9P0P0 153 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 GJA3Q9Y6H8 435 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 FLT1P17948 1338 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 LAMA4Q16363 1823 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 USP17L12C9JPN9 530 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 USP17L21D6R901 530 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 MCCP23508 829 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 TDO2P48775 406 aa10.66□□□□□ -0.7
HPS4-204ENST00000422379 HDLBPQ00341 1268 aaKnown RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms