RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 DNAJC14Q6Y2X3 702 aaPredicted RBP7.52□□□□□ -1.21
LINC00397-201ENST00000422074 YIPF2Q9BWQ6 316 aa7.52□□□□□ -1.21
LINC00397-201ENST00000422074 ACSS3Q9H6R3 686 aa7.52□□□□□ -1.21
LINC00397-201ENST00000422074 C12orf49Q9H741 205 aa7.52□□□□□ -1.21
LINC00397-201ENST00000422074 CRIM1Q9NZV1 1036 aa7.52□□□□□ -1.21
LINC00397-201ENST00000422074 GPN3Q9UHW5 284 aaPredicted RBP7.52□□□□□ -1.21
LINC00397-201ENST00000422074 AKAP2Q9Y2D5 859 aa7.52□□□□□ -1.21
LINC00397-201ENST00000422074 KIAA1324LA8MWY0 1029 aaPredicted RBP7.51□□□□□ -1.21
LINC00397-201ENST00000422074 TMPRSS2O15393 492 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 PRPF40AO75400 957 aaKnown RBP7.51□□□□□ -1.21
LINC00397-201ENST00000422074 NME2P22392 152 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 FGD1P98174 961 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 ZNF252P-AS1Q0IIN9 211 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 PDE3AQ14432 1141 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 CPSF6Q16630 551 aaKnown RBP eCLIP7.51□□□□□ -1.21
LINC00397-201ENST00000422074 PAOXQ6QHF9 649 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 STK35Q8TDR2 534 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 WDR89Q96FK6 387 aaPredicted RBP7.51□□□□□ -1.21
LINC00397-201ENST00000422074 CEP44Q9C0F1 390 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 FAM8A1Q9UBU6 413 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 PPP1R9AQ9ULJ8 1098 aa7.51□□□□□ -1.21
LINC00397-201ENST00000422074 ANKRD33BA6NCL7 494 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 ENC1O14682 589 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 COBLO75128 1261 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 TGFB1P01137 390 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 LIG1P18858 919 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 BMP6P22004 513 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 RXRBP28702 533 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 INTS5Q6P9B9 1019 aaKnown RBP7.5□□□□□ -1.21
LINC00397-201ENST00000422074 SEZ6L2Q6UXD5 910 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 SULF2Q8IWU5 870 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 SHKBP1Q8TBC3 707 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 GATA6Q92908 595 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 EMILIN2Q9BXX0 1053 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 PRKAG2Q9UGJ0 569 aa7.5□□□□□ -1.21
LINC00397-201ENST00000422074 MED26O95402 600 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 SLFN14P0C7P3 912 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 GNA15P30679 374 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 HNRNPUQ00839 825 aaKnown RBP eCLIP7.49□□□□□ -1.21
LINC00397-201ENST00000422074 MAP7Q14244 749 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 SCARA3Q6AZY7 606 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 DYMQ7RTS9 669 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 SEMA6CQ9H3T2 930 aa7.49□□□□□ -1.21
LINC00397-201ENST00000422074 F13BP05160 661 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 ASPAP45381 313 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 NFKBIBQ15653 356 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 ZAR1Q86SH2 424 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 NPAS4Q8IUM7 802 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 MFSD14AQ96MC6 490 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 AP4E1Q9UPM8 1137 aa7.48□□□□□ -1.21
LINC00397-201ENST00000422074 WDR64B1ANS9 1081 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 NFICP08651 508 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 ID3Q02535 119 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 GIMAP7Q8NHV1 300 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 ATXN3LQ9H3M9 355 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 C1GALT1Q9NS00 363 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 AK5Q9Y6K8 562 aa7.47□□□□□ -1.21
LINC00397-201ENST00000422074 PAGE1O75459 146 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 USP17L7P0C7H9 530 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 SPINK2P20155 84 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 SSTR4P31391 388 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 ADMP35318 185 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 GRIK1P39086 918 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 EAPPQ56P03 285 aaPredicted RBP7.46□□□□□ -1.22
LINC00397-201ENST00000422074 ZC3H12AQ5D1E8 599 aaKnown RBP7.46□□□□□ -1.22
LINC00397-201ENST00000422074 TPTE2Q6XPS3 522 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 SV2BQ7L1I2 683 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 DTX1Q86Y01 620 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 SHISA5Q8N114 240 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 KCNB2Q92953 911 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 METTL22Q9BUU2 404 aaPredicted RBP7.46□□□□□ -1.22
LINC00397-201ENST00000422074 ZC3H12CQ9C0D7 883 aaKnown RBP7.46□□□□□ -1.22
LINC00397-201ENST00000422074 ATG3Q9NT62 314 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 PIM2Q9P1W9 311 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 SAMM50Q9Y512 469 aa7.46□□□□□ -1.22
LINC00397-201ENST00000422074 TRIM37O94972 964 aa7.45□□□□□ -1.22
LINC00397-201ENST00000422074 PCMTD2Q9NV79 361 aa7.45□□□□□ -1.22
LINC00397-201ENST00000422074 ERCC3P19447 782 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 RAB6AP20340 208 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 EIF4BP23588 611 aaKnown RBP7.44□□□□□ -1.22
LINC00397-201ENST00000422074 ERVK-24P63145 666 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 FBXO33Q7Z6M2 555 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 GPBAR1Q8TDU6 330 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 TBC1D32Q96NH3 1257 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 DUSP9Q99956 384 aaKnown RBP7.44□□□□□ -1.22
LINC00397-201ENST00000422074 CYP8B1Q9UNU6 501 aa7.44□□□□□ -1.22
LINC00397-201ENST00000422074 DYNC1LI2O43237 492 aaPredicted RBP7.43□□□□□ -1.22
LINC00397-201ENST00000422074 FBXO24O75426 580 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 FOSL1P15407 271 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 RING1Q06587 406 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 LRRC14Q15048 493 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 RASIP1Q5U651 963 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 MAP1SQ66K74 1059 aaPredicted RBP7.43□□□□□ -1.22
LINC00397-201ENST00000422074 NBPF11Q86T75 865 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 FBXL6Q8N531 539 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 GRIN3AQ8TCU5 1115 aa7.43□□□□□ -1.22
LINC00397-201ENST00000422074 OSBPL1AQ9BXW6 950 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms