RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 PPM1EQ8WY54 764 aa15.46■□□□□ 0.07
UFD1-203ENST00000421968 LRFN3Q9BTN0 628 aa15.46■□□□□ 0.07
UFD1-203ENST00000421968 THEGQ9P2T0 379 aa15.46■□□□□ 0.07
UFD1-203ENST00000421968 IGHMBP2P38935 993 aaKnown RBP15.45■□□□□ 0.06
UFD1-203ENST00000421968 TRIM32Q13049 653 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 KRT24Q2M2I5 525 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 C9orf50Q5SZB4 431 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 HDGFL1Q5TGJ6 251 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 GPAT2Q6NUI2 795 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 CCDC191Q8NCU4 936 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 MYD88Q99836 296 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 DBF4Q9UBU7 674 aaPredicted RBP15.45■□□□□ 0.06
UFD1-203ENST00000421968 SERPINA10Q9UK55 444 aa15.45■□□□□ 0.06
UFD1-203ENST00000421968 MYO9BQ13459 2157 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 INPP5BP32019 993 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 MRPS5P82675 430 aaKnown RBP15.44■□□□□ 0.06
UFD1-203ENST00000421968 TTLL11Q8NHH1 800 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 HOOK2Q96ED9 719 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 BABAM1Q9NWV8 329 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 HYPKQ9NX55 129 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 CWC25Q9NXE8 425 aaPredicted RBP15.44■□□□□ 0.06
UFD1-203ENST00000421968 PRKAG2Q9UGJ0 569 aa15.44■□□□□ 0.06
UFD1-203ENST00000421968 TTF2Q9UNY4 1162 aaKnown RBP15.44■□□□□ 0.06
UFD1-203ENST00000421968 IL1R1P14778 569 aa15.43■□□□□ 0.06
UFD1-203ENST00000421968 GRIN2CQ14957 1233 aa15.43■□□□□ 0.06
UFD1-203ENST00000421968 DCAF15Q66K64 600 aa15.43■□□□□ 0.06
UFD1-203ENST00000421968 ZNF341Q9BYN7 854 aa15.43■□□□□ 0.06
UFD1-203ENST00000421968 SNAP23O00161 211 aa15.42■□□□□ 0.06
UFD1-203ENST00000421968 CACNB3P54284 484 aa15.42■□□□□ 0.06
UFD1-203ENST00000421968 GOLGA2Q08379 1002 aa15.42■□□□□ 0.06
UFD1-203ENST00000421968 MIGA2Q7L4E1 593 aa15.42■□□□□ 0.06
UFD1-203ENST00000421968 ZNF804AQ7Z570 1209 aa15.42■□□□□ 0.06
UFD1-203ENST00000421968 SMCR8Q8TEV9 937 aaPredicted RBP15.42■□□□□ 0.06
UFD1-203ENST00000421968 MPHOSPH8Q99549 860 aa15.42■□□□□ 0.06
UFD1-203ENST00000421968 NECAB3Q96P71 396 aaPredicted RBP15.41■□□□□ 0.06
UFD1-203ENST00000421968 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
UFD1-203ENST00000421968 TCF20Q9UGU0 1960 aaKnown RBP15.41■□□□□ 0.06
UFD1-203ENST00000421968 CRKP46108 304 aa15.4■□□□□ 0.06
UFD1-203ENST00000421968 MFSD14BQ5SR56 506 aa15.4■□□□□ 0.06
UFD1-203ENST00000421968 ANKRD13CQ8N6S4 541 aa15.4■□□□□ 0.06
UFD1-203ENST00000421968 PLEKHF1Q96S99 279 aa15.4■□□□□ 0.06
UFD1-203ENST00000421968 P2RX7Q99572 595 aaKnown RBP15.4■□□□□ 0.06
UFD1-203ENST00000421968 MYH3P11055 1940 aa15.4■□□□□ 0.06
UFD1-203ENST00000421968 CXCL11O14625 94 aa15.39■□□□□ 0.05
UFD1-203ENST00000421968 CHRNDQ07001 517 aa15.39■□□□□ 0.05
UFD1-203ENST00000421968 PDE3AQ14432 1141 aa15.39■□□□□ 0.05
UFD1-203ENST00000421968 C15orf52Q6ZUT6 534 aaKnown RBP15.39■□□□□ 0.05
UFD1-203ENST00000421968 FASTKD5Q7L8L6 764 aaKnown RBP15.39■□□□□ 0.05
UFD1-203ENST00000421968 TAF5LO75529 589 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
UFD1-203ENST00000421968 TMEM31Q5JXX7 168 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 GADL1Q6ZQY3 521 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 EPHX3Q9H6B9 360 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 TMOD2Q9NZR1 351 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 MAPK8IP3Q9UPT6 1336 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 LTBP2Q14767 1821 aa15.38■□□□□ 0.05
UFD1-203ENST00000421968 DNAH12Q6ZR08 3092 aa15.37■□□□□ 0.05
UFD1-203ENST00000421968 MRE11P49959 708 aa15.37■□□□□ 0.05
UFD1-203ENST00000421968 POTEEQ6S8J3 1075 aa15.37■□□□□ 0.05
UFD1-203ENST00000421968 FAM83AQ86UY5 434 aa15.37■□□□□ 0.05
UFD1-203ENST00000421968 TRIB2Q92519 343 aa15.37■□□□□ 0.05
UFD1-203ENST00000421968 SENP6Q9GZR1 1112 aaPredicted RBP15.37■□□□□ 0.05
UFD1-203ENST00000421968 MAST2Q6P0Q8 1798 aa15.36■□□□□ 0.05
UFD1-203ENST00000421968 ITGA6P23229 1130 aa15.36■□□□□ 0.05
UFD1-203ENST00000421968 PPP2R1AP30153 589 aa15.36■□□□□ 0.05
UFD1-203ENST00000421968 ATN1P54259 1190 aaPredicted RBP15.36■□□□□ 0.05
UFD1-203ENST00000421968 MAP3K21Q5TCX8 1036 aa15.36■□□□□ 0.05
UFD1-203ENST00000421968 GAS2L1Q99501 681 aaPredicted RBP15.36■□□□□ 0.05
UFD1-203ENST00000421968 GJD2Q9UKL4 321 aa15.36■□□□□ 0.05
UFD1-203ENST00000421968 SLC45A1Q9Y2W3 748 aa15.36■□□□□ 0.05
UFD1-203ENST00000421968 A0A0G2JLL6 359 aaPredicted RBP15.35■□□□□ 0.05
UFD1-203ENST00000421968 HOXB7P09629 217 aa15.35■□□□□ 0.05
UFD1-203ENST00000421968 PRRT2Q7Z6L0 340 aaPredicted RBP15.35■□□□□ 0.05
UFD1-203ENST00000421968 BADQ92934 168 aa15.35■□□□□ 0.05
UFD1-203ENST00000421968 ZNF576Q9H609 170 aa15.35■□□□□ 0.05
UFD1-203ENST00000421968 PHAXQ9H814 394 aaKnown RBP15.35■□□□□ 0.05
UFD1-203ENST00000421968 ZNF112Q9UJU3 913 aa15.35■□□□□ 0.05
UFD1-203ENST00000421968 AK9Q5TCS8 1911 aa15.35■□□□□ 0.05
UFD1-203ENST00000421968 RIPK4P57078 832 aa15.34■□□□□ 0.05
UFD1-203ENST00000421968 CCDC85BQ15834 202 aaPredicted RBP15.34■□□□□ 0.05
UFD1-203ENST00000421968 FAM110CQ1W6H9 321 aa15.34■□□□□ 0.05
UFD1-203ENST00000421968 NOL9Q5SY16 702 aaKnown RBP15.34■□□□□ 0.05
UFD1-203ENST00000421968 AKNAD1Q5T1N1 836 aa15.34■□□□□ 0.05
UFD1-203ENST00000421968 LHX8Q68G74 356 aa15.34■□□□□ 0.05
UFD1-203ENST00000421968 PIAS4Q8N2W9 510 aaPredicted RBP15.34■□□□□ 0.05
UFD1-203ENST00000421968 RNPC3Q96LT9 517 aaKnown RBP15.34■□□□□ 0.05
UFD1-203ENST00000421968 PRDM5Q9NQX1 630 aaPredicted RBP15.34■□□□□ 0.05
UFD1-203ENST00000421968 CYP2B6P20813 491 aa15.33■□□□□ 0.04
UFD1-203ENST00000421968 DNAJB2P25686 324 aa15.33■□□□□ 0.04
UFD1-203ENST00000421968 RTP1P59025 263 aa15.33■□□□□ 0.04
UFD1-203ENST00000421968 METTL22Q9BUU2 404 aaPredicted RBP15.33■□□□□ 0.04
UFD1-203ENST00000421968 LAS1LQ9Y4W2 734 aaKnown RBP15.33■□□□□ 0.04
UFD1-203ENST00000421968 ZHX2Q9Y6X8 837 aa15.33■□□□□ 0.04
UFD1-203ENST00000421968 FKBP1CQ5VVH2 108 aa15.32■□□□□ 0.04
UFD1-203ENST00000421968 PNNQ9H307 717 aaKnown RBP15.32■□□□□ 0.04
UFD1-203ENST00000421968 ATP11BQ9Y2G3 1177 aa15.32■□□□□ 0.04
UFD1-203ENST00000421968 RPAP1Q9BWH6 1393 aaPredicted RBP15.32■□□□□ 0.04
UFD1-203ENST00000421968 CHL1O00533 1208 aa15.31■□□□□ 0.04
UFD1-203ENST00000421968 BMP1P13497 986 aa15.31■□□□□ 0.04
UFD1-203ENST00000421968 CCND3P30281 292 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms