RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 APPBP2Q92624 585 aa21.16■□□□□ 0.98
LINC00271-201ENST00000421378 AATFQ9NY61 560 aaKnown RBP eCLIP21.16■□□□□ 0.98
LINC00271-201ENST00000421378 BAG3O95817 575 aa21.15■□□□□ 0.98
LINC00271-201ENST00000421378 HIRAP54198 1017 aaPredicted RBP21.15■□□□□ 0.98
LINC00271-201ENST00000421378 EAPPQ56P03 285 aaPredicted RBP21.15■□□□□ 0.98
LINC00271-201ENST00000421378 MIGA1Q8NAN2 632 aa21.15■□□□□ 0.98
LINC00271-201ENST00000421378 ECM29Q5VYK3 1845 aa21.15■□□□□ 0.98
LINC00271-201ENST00000421378 HIP1O00291 1037 aa21.14■□□□□ 0.98
LINC00271-201ENST00000421378 DIAPH3Q9NSV4 1193 aa21.14■□□□□ 0.98
LINC00271-201ENST00000421378 CERS3Q8IU89 383 aa21.14■□□□□ 0.97
LINC00271-201ENST00000421378 TDRD3Q9H7E2 651 aaKnown RBP21.14■□□□□ 0.97
LINC00271-201ENST00000421378 MAGEB6P1A0A0J9YX57 407 aa21.13■□□□□ 0.97
LINC00271-201ENST00000421378 PLCG2P16885 1265 aa21.13■□□□□ 0.97
LINC00271-201ENST00000421378 ZMYM1Q5SVZ6 1142 aa21.13■□□□□ 0.97
LINC00271-201ENST00000421378 ZNF784Q8NCA9 323 aaPredicted RBP21.13■□□□□ 0.97
LINC00271-201ENST00000421378 PUS7LQ9H0K6 701 aaKnown RBP21.13■□□□□ 0.97
LINC00271-201ENST00000421378 CLRN2A0PK11 232 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 PPP4CP60510 307 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 SPDYE2Q495Y8 402 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 CDC42EP5Q6NZY7 148 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 OSBP2Q969R2 916 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 AIDAQ96BJ3 306 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 RIOK1Q9BRS2 568 aaKnown RBP21.12■□□□□ 0.97
LINC00271-201ENST00000421378 GGA3Q9NZ52 723 aa21.12■□□□□ 0.97
LINC00271-201ENST00000421378 ASTN2O75129 1339 aaPredicted RBP21.12■□□□□ 0.97
LINC00271-201ENST00000421378 NMIQ13287 307 aaPredicted RBP21.11■□□□□ 0.97
LINC00271-201ENST00000421378 ZC3H15Q8WU90 426 aaKnown RBP21.11■□□□□ 0.97
LINC00271-201ENST00000421378 FAM227BQ96M60 508 aa21.11■□□□□ 0.97
LINC00271-201ENST00000421378 USP40Q9NVE5 1235 aa21.11■□□□□ 0.97
LINC00271-201ENST00000421378 TMOD2Q9NZR1 351 aa21.11■□□□□ 0.97
LINC00271-201ENST00000421378 A0A0D9SFI3 127 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 MBD4O95243 580 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 RHBDL3P58872 404 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 DYNLL1P63167 89 aaKnown RBP21.1■□□□□ 0.97
LINC00271-201ENST00000421378 ANGEL2Q5VTE6 544 aaKnown RBP21.1■□□□□ 0.97
LINC00271-201ENST00000421378 CWC27Q6UX04 472 aaKnown RBP21.1■□□□□ 0.97
LINC00271-201ENST00000421378 SEC62Q99442 399 aaKnown RBP21.1■□□□□ 0.97
LINC00271-201ENST00000421378 VEZTQ9HBM0 779 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 HELLSQ9NRZ9 838 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 ZNF70Q9UC06 446 aaPredicted RBP21.1■□□□□ 0.97
LINC00271-201ENST00000421378 M0R2C6 588 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 POTEIP0CG38 1075 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 POTEJP0CG39 1038 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 CHMLP26374 656 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 LCORLQ8N3X6 602 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 SH3RF3Q8TEJ3 882 aaPredicted RBP21.1■□□□□ 0.97
LINC00271-201ENST00000421378 ARMT1Q9H993 441 aa21.1■□□□□ 0.97
LINC00271-201ENST00000421378 CACNB3P54284 484 aa21.09■□□□□ 0.97
LINC00271-201ENST00000421378 LDHDQ86WU2 507 aa21.09■□□□□ 0.97
LINC00271-201ENST00000421378 CLEC11AQ9Y240 323 aa21.09■□□□□ 0.97
LINC00271-201ENST00000421378 PITPNM2Q9BZ72 1349 aa21.09■□□□□ 0.97
LINC00271-201ENST00000421378 KIF3CO14782 793 aa21.08■□□□□ 0.97
LINC00271-201ENST00000421378 GPAA1O43292 621 aa21.08■□□□□ 0.97
LINC00271-201ENST00000421378 CDC45O75419 566 aa21.08■□□□□ 0.97
LINC00271-201ENST00000421378 MCMDC2Q4G0Z9 681 aa21.08■□□□□ 0.97
LINC00271-201ENST00000421378 APOBEC3FQ8IUX4 373 aaKnown RBP21.08■□□□□ 0.97
LINC00271-201ENST00000421378 TEX11Q8IYF3 940 aa21.08■□□□□ 0.97
LINC00271-201ENST00000421378 DCPSQ96C86 337 aaKnown RBP21.08■□□□□ 0.97
LINC00271-201ENST00000421378 WDHD1O75717 1129 aaPredicted RBP21.07■□□□□ 0.96
LINC00271-201ENST00000421378 TNFAIP1Q13829 316 aa21.07■□□□□ 0.96
LINC00271-201ENST00000421378 CASC1Q6TDU7 716 aa21.07■□□□□ 0.96
LINC00271-201ENST00000421378 CRNKL1Q9BZJ0 848 aaKnown RBP21.07■□□□□ 0.96
LINC00271-201ENST00000421378 PGAP2Q9UHJ9 254 aa21.07■□□□□ 0.96
LINC00271-201ENST00000421378 TCP10L2B9ZVM9 353 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 NFIAQ12857 509 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 FKBP1CQ5VVH2 108 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 RUFY2Q8WXA3 655 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 STRBPQ96SI9 672 aaKnown RBP21.06■□□□□ 0.96
LINC00271-201ENST00000421378 IDI2Q9BXS1 227 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 CDK5RAP2Q96SN8 1893 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 FOCADQ5VW36 1801 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 CCDC129Q6ZRS4 1044 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 SULF1Q8IWU6 871 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 RAD50Q92878 1312 aa21.06■□□□□ 0.96
LINC00271-201ENST00000421378 CCDC171Q6TFL3 1326 aa21.05■□□□□ 0.96
LINC00271-201ENST00000421378 GNAT2P19087 354 aa21.05■□□□□ 0.96
LINC00271-201ENST00000421378 USP5P45974 858 aa21.05■□□□□ 0.96
LINC00271-201ENST00000421378 TNNI2P48788 182 aa21.05■□□□□ 0.96
LINC00271-201ENST00000421378 MFAP1P55081 439 aaKnown RBP21.05■□□□□ 0.96
LINC00271-201ENST00000421378 PICALMQ13492 652 aa21.05■□□□□ 0.96
LINC00271-201ENST00000421378 ZNF589Q86UQ0 364 aaPredicted RBP21.05■□□□□ 0.96
LINC00271-201ENST00000421378 TGFBRAP1Q8WUH2 860 aa21.05■□□□□ 0.96
LINC00271-201ENST00000421378 SCAF8Q9UPN6 1271 aaKnown RBP21.05■□□□□ 0.96
LINC00271-201ENST00000421378 FLT1P17948 1338 aa21.04■□□□□ 0.96
LINC00271-201ENST00000421378 KRT26Q7Z3Y9 468 aa21.04■□□□□ 0.96
LINC00271-201ENST00000421378 FAM83AQ86UY5 434 aa21.04■□□□□ 0.96
LINC00271-201ENST00000421378 SDR42E1Q8WUS8 393 aa21.04■□□□□ 0.96
LINC00271-201ENST00000421378 DDX4Q9NQI0 724 aaKnown RBP21.04■□□□□ 0.96
LINC00271-201ENST00000421378 FAM198AQ9UFP1 575 aa21.04■□□□□ 0.96
LINC00271-201ENST00000421378 SLC4A4Q9Y6R1 1079 aa21.04■□□□□ 0.96
LINC00271-201ENST00000421378 NPM3O75607 178 aaKnown RBP21.03■□□□□ 0.96
LINC00271-201ENST00000421378 TCP10Q12799 353 aa21.03■□□□□ 0.96
LINC00271-201ENST00000421378 MAP1SQ66K74 1059 aaPredicted RBP21.03■□□□□ 0.96
LINC00271-201ENST00000421378 DEFB129Q9H1M3 183 aa21.03■□□□□ 0.96
LINC00271-201ENST00000421378 IL25Q9H293 177 aa21.03■□□□□ 0.96
LINC00271-201ENST00000421378 CNTNAP1P78357 1384 aa21.03■□□□□ 0.96
LINC00271-201ENST00000421378 POLR2AP24928 1970 aaKnown RBP21.02■□□□□ 0.96
LINC00271-201ENST00000421378 PRKAB2O43741 272 aa21.02■□□□□ 0.96
LINC00271-201ENST00000421378 ENTPD3O75355 529 aa21.02■□□□□ 0.96
LINC00271-201ENST00000421378 RASA3Q14644 834 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms