RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TFCP2Q12800 502 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 SEPT14Q6ZU15 432 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 TMTC1Q8IUR5 882 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 VCX3BQ9H321 246 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 MSH6P52701 1360 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 NDC80O14777 642 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 ZNF202O95125 648 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 FAM114A2Q9NRY5 505 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 SSX2IPQ9Y2D8 614 aa13.84□□□□□ -0.19
CLCN4-203ENST00000421085 KRT24Q2M2I5 525 aa13.83□□□□□ -0.19
CLCN4-203ENST00000421085 HS2ST1Q7LGA3 356 aa13.83□□□□□ -0.19
CLCN4-203ENST00000421085 PHF8Q9UPP1 1060 aa13.83□□□□□ -0.19
CLCN4-203ENST00000421085 TRAF5O00463 557 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 GSTO1P78417 241 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 WDR78Q5VTH9 848 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 KLHL7Q8IXQ5 586 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 MCUR1Q96AQ8 359 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 DTNBO60941 627 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 NAA16Q6N069 864 aaPredicted RBP13.83□□□□□ -0.2
CLCN4-203ENST00000421085 CEP120Q8N960 986 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 VCXQ9H320 206 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 PAK2Q13177 524 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.2
CLCN4-203ENST00000421085 MAGEB6P1A0A0J9YX57 407 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 KIF3CO14782 793 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 TNNI2P48788 182 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 BRD3Q15059 726 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 CCDC38Q502W7 563 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 CDC37L1Q7L3B6 337 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 TAOK1Q7L7X3 1001 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 MLKLQ8NB16 471 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 SLF1Q9BQI6 1058 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 RRP36Q96EU6 259 aaKnown RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 ZKSCAN3Q9BRR0 538 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 PPANQ9NQ55 473 aaKnown RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 PDE4DQ08499 809 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 SV2BQ7L1I2 683 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 NCOA5Q9HCD5 579 aaKnown RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 DMTNQ08495 405 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 CCDC152Q4G0S7 254 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 RILPL1Q5EBL4 403 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 XPO4Q9C0E2 1151 aaKnown RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 ZNF215Q9UL58 517 aaPredicted RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 NFE2L3Q9Y4A8 694 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 SPOPO43791 374 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 KRT9P35527 623 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 PLS1Q14651 629 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 CWF19L2Q2TBE0 894 aaKnown RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 AKNAD1Q5T1N1 836 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 MYCBPQ99417 103 aaPredicted RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 LLPHQ9BRT6 129 aaKnown RBP13.82□□□□□ -0.2
CLCN4-203ENST00000421085 FAM169AQ9Y6X4 670 aa13.82□□□□□ -0.2
CLCN4-203ENST00000421085 GNGT1P63211 74 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 PAK1Q13153 545 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 INF2Q27J81 1249 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 VWA3BQ502W6 1294 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 CSGALNACT2Q8N6G5 542 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 TACO1Q9BSH4 297 aaKnown RBP13.81□□□□□ -0.2
CLCN4-203ENST00000421085 GNAT2P19087 354 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 BEND3Q5T5X7 828 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 MAGEB6Q8N7X4 407 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 FOXO3O43524 673 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 GCKP35557 465 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 DPH6Q7L8W6 267 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 NUP58Q9BVL2 599 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 TAB2Q9NYJ8 693 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 LRMPQ12912 555 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 ASIC2Q16515 512 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 RNF10Q8N5U6 811 aaKnown RBP13.81□□□□□ -0.2
CLCN4-203ENST00000421085 MIGA1Q8NAN2 632 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 SMC1BQ8NDV3 1235 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 SMARCC2Q8TAQ2 1214 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 MICAL1Q8TDZ2 1067 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 STK38LQ9Y2H1 464 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 CEP104O60308 925 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 HSPA1LP34931 641 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 OTUD7BQ6GQQ9 843 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 ZNF354CQ86Y25 554 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 FMNL3Q8IVF7 1028 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 ACEP12821 1306 aa13.81□□□□□ -0.2
CLCN4-203ENST00000421085 CUTAO60888 179 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 TNFAIP3P21580 790 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 PPP1R2P41236 205 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 ADKP55263 362 aaKnown RBP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 CLUL1Q15846 466 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 DDX21Q9NR30 783 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 RPL13P26373 211 aaKnown RBP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 ERCC5P28715 1186 aaPredicted RBP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 LIG3P49916 1009 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 PLCD1P51178 756 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 CFAP221Q4G0U5 840 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 PLEKHA4Q9H4M7 779 aa13.8□□□□□ -0.2
CLCN4-203ENST00000421085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 CASQ2O14958 399 aaPredicted RBP13.8□□□□□ -0.2
CLCN4-203ENST00000421085 SLC39A6Q13433 755 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms