RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 MBIPQ9NS73 344 aa9.11□□□□□ -0.95
EPHA4-205ENST00000419964 CCDC9Q9Y3X0 531 aaKnown RBP9.11□□□□□ -0.95
EPHA4-205ENST00000419964 DLG5Q8TDM6 1919 aa9.11□□□□□ -0.95
EPHA4-205ENST00000419964 TRPM3Q9HCF6 1732 aaPredicted RBP9.11□□□□□ -0.95
EPHA4-205ENST00000419964 VAMP4O75379 141 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 MICAL2O94851 1124 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 GCP02774 474 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 ECM1Q16610 540 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 FIGNL1Q6PIW4 674 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 TREML1Q86YW5 311 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 ETFBKMTQ8IXQ9 262 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 TRIM22Q8IYM9 498 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 ORAI2Q96SN7 254 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 NUCKS1Q9H1E3 243 aaKnown RBP9.1□□□□□ -0.95
EPHA4-205ENST00000419964 FAM13BQ9NYF5 915 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 BCS1LQ9Y276 419 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 MAP3K5Q99683 1374 aa9.1□□□□□ -0.95
EPHA4-205ENST00000419964 LMTK3Q96Q04 1460 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 PTPRCP08575 1304 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 OVOS2A0A0G2JMS6 1433 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 NCAPD2Q15021 1401 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 POTECB2RU33 542 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 TRIM27P14373 513 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 ITGA6P23229 1130 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 ARHGAP4P98171 946 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 SAMD5Q5TGI4 173 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 BTLAQ7Z6A9 289 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 ARHGEF25Q86VW2 580 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 PANK1Q8TE04 598 aa9.09□□□□□ -0.95
EPHA4-205ENST00000419964 NOB1Q9ULX3 412 aaKnown RBP9.09□□□□□ -0.95
EPHA4-205ENST00000419964 CRB1P82279 1406 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 TNS3Q68CZ2 1445 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 ALS2Q96Q42 1657 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 ZBTB39O15060 712 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 ZAP70P43403 619 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 MTHFSDQ2M296 383 aaKnown RBP9.08□□□□□ -0.96
EPHA4-205ENST00000419964 PLEKHO1Q53GL0 409 aaPredicted RBP9.08□□□□□ -0.96
EPHA4-205ENST00000419964 NUTM2GQ5VZR2 741 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 KLRG1Q96E93 195 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 BCL2L13Q9BXK5 485 aa9.08□□□□□ -0.96
EPHA4-205ENST00000419964 DMGDHQ9UI17 866 aaKnown RBP9.08□□□□□ -0.96
EPHA4-205ENST00000419964 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 NDUFB5O43674 189 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 ANP32AP39687 249 aaKnown RBP9.07□□□□□ -0.96
EPHA4-205ENST00000419964 IDH3AP50213 366 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 MARSP56192 900 aaKnown RBP9.07□□□□□ -0.96
EPHA4-205ENST00000419964 HDAC1Q13547 482 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-205ENST00000419964 FAM26DQ5JW98 314 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 ITPRIPQ8IWB1 547 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 CEP63Q96MT8 703 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 ZCCHC2Q9C0B9 1178 aaKnown RBP9.07□□□□□ -0.96
EPHA4-205ENST00000419964 TSPYL4Q9UJ04 414 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 BRPF3Q9ULD4 1205 aa9.07□□□□□ -0.96
EPHA4-205ENST00000419964 MED1Q15648 1581 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-205ENST00000419964 FAM208AQ9UK61 1670 aaKnown RBP9.07□□□□□ -0.96
EPHA4-205ENST00000419964 PPFIA3O75145 1194 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 HOXB7P09629 217 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 EPB42P16452 691 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 PCSK2P16519 638 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 ARSDP51689 593 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 MFAP1P55081 439 aaKnown RBP9.06□□□□□ -0.96
EPHA4-205ENST00000419964 TAF7Q15545 349 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-205ENST00000419964 DBN1Q16643 649 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 AKAP4Q5JQC9 854 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 STK31Q9BXU1 1019 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 DCTN4Q9UJW0 460 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 PCDHGC4Q9Y5F7 938 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
EPHA4-205ENST00000419964 ABCC4O15439 1325 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 CPDO75976 1380 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 FAM83GA6ND36 823 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 ATXN7O15265 892 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-205ENST00000419964 EIF5BO60841 1220 aaKnown RBP9.05□□□□□ -0.96
EPHA4-205ENST00000419964 RLBP1P12271 317 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 MZF1P28698 734 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-205ENST00000419964 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 FOXR1Q6PIV2 292 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 MCM10Q7L590 875 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 ATCAYQ86WG3 371 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 ANKRD24Q8TF21 1146 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 PIK3R5Q8WYR1 880 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 CITED4Q96RK1 184 aa9.05□□□□□ -0.96
EPHA4-205ENST00000419964 THUMPD2Q9BTF0 503 aaKnown RBP9.05□□□□□ -0.96
EPHA4-205ENST00000419964 CUEDC1Q9NWM3 386 aaPredicted RBP9.05□□□□□ -0.96
EPHA4-205ENST00000419964 STRCP1A6NGW2 1772 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 OPLAHO14841 1288 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 RPLP1P05386 114 aaKnown RBP9.04□□□□□ -0.96
EPHA4-205ENST00000419964 FAM157BP0CG42 384 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 MAPK1P28482 360 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 INPP5BP32019 993 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 USP5P45974 858 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 HSPA2P54652 639 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 DNM1Q05193 864 aaKnown RBP9.04□□□□□ -0.96
EPHA4-205ENST00000419964 TYRO3Q06418 890 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 DCTN1Q14203 1278 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 CCDC30Q5VVM6 783 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 TMEM57Q8N5G2 664 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 C8orf58Q8NAV2 365 aa9.04□□□□□ -0.96
EPHA4-205ENST00000419964 ZNF837Q96EG3 531 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-205ENST00000419964 LTV1Q96GA3 475 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms