RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 RAB6BQ9NRW1 208 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 SERTAD1Q9UHV2 236 aa9.02□□□□□ -0.97
HMGN1-205ENST00000419378 BRCA1P38398 1863 aaKnown RBP9.02□□□□□ -0.97
HMGN1-205ENST00000419378 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 M0R2N6 131 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 CHL1O00533 1208 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 GRIN3BO60391 1043 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 INHAP05111 366 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 ADH1AP07327 375 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 DPEP1P16444 411 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 TBC1D9BQ66K14 1250 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 BICDL1Q6ZP65 573 aa9.01□□□□□ -0.97
HMGN1-205ENST00000419378 CARMIL3Q8ND23 1372 aa9□□□□□ -0.97
HMGN1-205ENST00000419378 PATL2C9JE40 543 aaKnown RBP9□□□□□ -0.97
HMGN1-205ENST00000419378 SERPINB2P05120 415 aa9□□□□□ -0.97
HMGN1-205ENST00000419378 TIMP2P16035 220 aa9□□□□□ -0.97
HMGN1-205ENST00000419378 KDF1Q8NAX2 398 aaPredicted RBP9□□□□□ -0.97
HMGN1-205ENST00000419378 HPS1Q92902 700 aa9□□□□□ -0.97
HMGN1-205ENST00000419378 ARHGEF10LQ9HCE6 1279 aa9□□□□□ -0.97
HMGN1-205ENST00000419378 LAS1LQ9Y4W2 734 aaKnown RBP9□□□□□ -0.97
HMGN1-205ENST00000419378 ERBB4Q15303 1308 aa9□□□□□ -0.97
HMGN1-205ENST00000419378 DLEC1Q9Y238 1755 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 MYL6BP14649 208 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 KCNA3P22001 575 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 CHRNA5P30532 468 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 OCLNQ16625 522 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 Q6ZVU0 165 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 TNS4Q8IZW8 715 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 AGBL1Q96MI9 1066 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 GZF1Q9H116 711 aaPredicted RBP8.99□□□□□ -0.97
HMGN1-205ENST00000419378 ZNF652Q9Y2D9 606 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 IVNS1ABPQ9Y6Y0 642 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 ANKRD31Q8N7Z5 1873 aa8.99□□□□□ -0.97
HMGN1-205ENST00000419378 COL11A2P13942 1736 aaPredicted RBP8.98□□□□□ -0.97
HMGN1-205ENST00000419378 BACH1O14867 736 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 EIF2S2P20042 333 aaKnown RBP8.98□□□□□ -0.97
HMGN1-205ENST00000419378 SCNN1AP37088 669 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 CALD1Q05682 793 aaKnown RBP8.98□□□□□ -0.97
HMGN1-205ENST00000419378 KRT24Q2M2I5 525 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 PRR5LQ6MZQ0 368 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 CLEC4GQ6UXB4 293 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 NGEFQ8N5V2 710 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 SETDB2Q96T68 719 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 MBIPQ9NS73 344 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 IFT57Q9NWB7 429 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 BCS1LQ9Y276 419 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 ARFGEF1Q9Y6D6 1849 aa8.98□□□□□ -0.97
HMGN1-205ENST00000419378 ATP10DQ9P241 1426 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 SENP3-EIF4A1A0A087X0R7 540 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 IL2RAP01589 272 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 HOXB7P09629 217 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 ZNF853P0CG23 659 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 PTGIRP43119 386 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 GNAI1P63096 354 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 RELBQ01201 579 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 HLFQ16534 295 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 PROSER3Q2NL68 480 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 KIF6Q6ZMV9 814 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 TTLL7Q6ZT98 887 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 LRP10Q7Z4F1 713 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 CNBD1Q8NA66 436 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 XAGE2Q96GT9 111 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 CXXC1Q9P0U4 656 aaPredicted RBP8.97□□□□□ -0.97
HMGN1-205ENST00000419378 PIM2Q9P1W9 311 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 PDZRN3Q9UPQ7 1066 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 MAP3K15Q6ZN16 1313 aa8.97□□□□□ -0.97
HMGN1-205ENST00000419378 NUP98P52948 1817 aa8.96□□□□□ -0.97
HMGN1-205ENST00000419378 A0A1W2PRU2 124 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 ERVV-1B6SEH8 477 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 RGS20O76081 388 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 ANXA1P04083 346 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 WEE1P30291 646 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 CCDC27Q2M243 656 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 DALRD3Q5D0E6 543 aaKnown RBP8.96□□□□□ -0.98
HMGN1-205ENST00000419378 NBPF5PQ86XG9 351 aaPredicted RBP8.96□□□□□ -0.98
HMGN1-205ENST00000419378 CNKSR1Q969H4 720 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 BRIP1Q9BX63 1249 aa8.96□□□□□ -0.98
HMGN1-205ENST00000419378 NIP7Q9Y221 180 aaKnown RBP eCLIP8.96□□□□□ -0.98
HMGN1-205ENST00000419378 H0YIN7 160 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 NPHP1O15259 732 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 ARID4AP29374 1257 aaPredicted RBP8.95□□□□□ -0.98
HMGN1-205ENST00000419378 SMTNP53814 917 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 EPHA4P54764 986 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 ST5P78524 1137 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 DUSP27Q5VZP5 1158 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 C2CD5Q86YS7 1000 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 PURBQ96QR8 312 aaKnown RBP8.95□□□□□ -0.98
HMGN1-205ENST00000419378 ESYT1Q9BSJ8 1104 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 DDX21Q9NR30 783 aaKnown RBP eCLIP8.95□□□□□ -0.98
HMGN1-205ENST00000419378 GNEQ9Y223 722 aaKnown RBP8.95□□□□□ -0.98
HMGN1-205ENST00000419378 ADCY9O60503 1353 aa8.95□□□□□ -0.98
HMGN1-205ENST00000419378 TNRC6CQ9HCJ0 1690 aaKnown RBP8.94□□□□□ -0.98
HMGN1-205ENST00000419378 ANKRD36CQ5JPF3 1778 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 A6NJY4 79 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 FAM177BA6PVY3 158 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 MEN1O00255 615 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 PDE6BP35913 854 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 CLN3Q13286 438 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 FAM9BQ8IZU0 186 aa8.94□□□□□ -0.98
HMGN1-205ENST00000419378 MEIOBQ8N635 442 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms