RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 C12orf50Q8NA57 414 aaPredicted RBP7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 KCNB2Q92953 911 aa7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 CRELD1Q96HD1 420 aa7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 MYRFLQ96LU7 910 aa7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 PPP1R9AQ9ULJ8 1098 aa7.86□□□□□ -1.15
HMGB1P49-201ENST00000418882 CCDC85BQ15834 202 aaPredicted RBP7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 MAP3K11Q16584 847 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 SGO2Q562F6 1265 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 PRR23CQ6ZRP0 262 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 SV2BQ7L1I2 683 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 GPBAR1Q8TDU6 330 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 UTP4Q969X6 686 aaKnown RBP7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 CYP4F12Q9HCS2 524 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 ACTL7BQ9Y614 415 aa7.85□□□□□ -1.15
HMGB1P49-201ENST00000418882 USP31Q70CQ4 1352 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 F6X3S4 739 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 TMPRSS2O15393 492 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 EIF4EBP3O60516 100 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 ADAM23O75077 832 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 H2AFB1P0C5Y9 115 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 H2AFB2P0C5Z0 115 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 PTPN11Q06124 597 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 TAF1CQ15572 869 aaPredicted RBP7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 KIF4BQ2VIQ3 1234 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 ZNF326Q5BKZ1 582 aaKnown RBP7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 CDPF1Q6NVV7 123 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 SEMA6BQ9H3T3 888 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 CBX8Q9HC52 389 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 MRS2Q9HD23 443 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 KRT82Q9NSB4 513 aa7.84□□□□□ -1.15
HMGB1P49-201ENST00000418882 BMP3P12645 472 aa7.83□□□□□ -1.16
HMGB1P49-201ENST00000418882 UVSSAQ2YD98 709 aa7.83□□□□□ -1.16
HMGB1P49-201ENST00000418882 FAM20CQ8IXL6 584 aa7.83□□□□□ -1.16
HMGB1P49-201ENST00000418882 GAL3ST3Q96A11 431 aa7.83□□□□□ -1.16
HMGB1P49-201ENST00000418882 FAM105AQ9NUU6 356 aa7.83□□□□□ -1.16
HMGB1P49-201ENST00000418882 AP4E1Q9UPM8 1137 aa7.83□□□□□ -1.16
HMGB1P49-201ENST00000418882 UNCXA6NJT0 531 aa7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 SART1O43290 800 aaKnown RBP7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 ST13P50502 369 aaKnown RBP7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 TTBK2Q6IQ55 1244 aa7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 GSX1Q9H4S2 264 aaPredicted RBP7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 RAD18Q9NS91 495 aa7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 PCDHB5Q9Y5E4 795 aa7.82□□□□□ -1.16
HMGB1P49-201ENST00000418882 HMX2A2RU54 273 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 DHX15O43143 795 aaKnown RBP7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 GAS2O43903 313 aaKnown RBP7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 CDK8P49336 464 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 LIG3P49916 1009 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 LLGL2Q6P1M3 1020 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 TRIM42Q8IWZ5 723 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 FBLIM1Q8WUP2 373 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 EMILIN2Q9BXX0 1053 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 C7orf69Q9H7B7 122 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 CRIM1Q9NZV1 1036 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 TLR6Q9Y2C9 796 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 RAXQ9Y2V3 346 aa7.81□□□□□ -1.16
HMGB1P49-201ENST00000418882 TFE3P19532 575 aaPredicted RBP7.8□□□□□ -1.16
HMGB1P49-201ENST00000418882 PRSS36Q5K4E3 855 aa7.8□□□□□ -1.16
HMGB1P49-201ENST00000418882 DYMQ7RTS9 669 aa7.8□□□□□ -1.16
HMGB1P49-201ENST00000418882 SHISA5Q8N114 240 aa7.8□□□□□ -1.16
HMGB1P49-201ENST00000418882 DISC1Q9NRI5 854 aa7.8□□□□□ -1.16
HMGB1P49-201ENST00000418882 SYNGAP1Q96PV0 1343 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 TRIM37O94972 964 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 MAP4P27816 1152 aaKnown RBP7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 SEPT6Q14141 434 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 ZC3H12AQ5D1E8 599 aaKnown RBP7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 HP1BP3Q5SSJ5 553 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 AGMOQ6ZNB7 445 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 BEND4Q6ZU67 534 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 ZNF428Q96B54 188 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 FANCD2OSQ96PS1 177 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 NOC4LQ9BVI4 516 aaKnown RBP7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 KCNF1Q9H3M0 494 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 PODXL2Q9NZ53 605 aa7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 KIAA1522Q9P206 1035 aaPredicted RBP7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 CCDC9Q9Y3X0 531 aaKnown RBP7.79□□□□□ -1.16
HMGB1P49-201ENST00000418882 DYNC1LI2O43237 492 aaPredicted RBP7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 RECKO95980 971 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 NEFMP07197 916 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 RAB6AP20340 208 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 ID3Q02535 119 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 INPP5AQ14642 412 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 PHC3Q8NDX5 983 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 ACSS3Q9H6R3 686 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 COPRSQ9NQ92 184 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 STOML1Q9UBI4 398 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 CYP8B1Q9UNU6 501 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 HIF3AQ9Y2N7 669 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 SAMM50Q9Y512 469 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 CSADQ9Y600 493 aa7.78□□□□□ -1.16
HMGB1P49-201ENST00000418882 DCDC2CA8MYV0 355 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 FSTP19883 344 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 NTF4P34130 210 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 ASPAP45381 313 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 LRRC14Q15048 493 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 UBE3DQ7Z6J8 389 aa7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 EZH1Q92800 747 aaPredicted RBP7.77□□□□□ -1.17
HMGB1P49-201ENST00000418882 ACSBG1Q96GR2 724 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms