RNA–Protein interactions for RNA: ENST00000418800.6

DDR1-232, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene DDR1, Length 3,588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-232ENST00000418800 FMR1NBQ8N0W7 255 aaPredicted RBP13.35□□□□□ -0.27
DDR1-232ENST00000418800 LINC00301Q8NCQ3 95 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 RIN2Q8WYP3 895 aaPredicted RBP13.35□□□□□ -0.27
DDR1-232ENST00000418800 ATP2C2O75185 946 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 MAGEA9P43362 315 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 MUM1L1Q5H9M0 696 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 CCDC91Q7Z6B0 441 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 ZNF526Q8TF50 670 aaPredicted RBP13.35□□□□□ -0.27
DDR1-232ENST00000418800 MPHOSPH8Q99549 860 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 ZKSCAN3Q9BRR0 538 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 CEP126Q9P2H0 1117 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 PARP3Q9Y6F1 533 aa13.35□□□□□ -0.27
DDR1-232ENST00000418800 ERLIN2O94905 339 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 TXLNAP40222 546 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 NOP2P46087 812 aaKnown RBP13.34□□□□□ -0.27
DDR1-232ENST00000418800 SAMM50Q9Y512 469 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 hCG_1642624A0A1W2PR95 340 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 CTAGE15A4D2H0 777 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 POLR2DO15514 142 aaKnown RBP13.34□□□□□ -0.27
DDR1-232ENST00000418800 ZEB2O60315 1214 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 CTDNEP1O95476 244 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 CTAGE8P0CG41 777 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 KCNA4P22459 653 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 PDE6BP35913 854 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 METAP2P50579 478 aaKnown RBP eCLIP13.34□□□□□ -0.276e-6■■■■□ 24.8
DDR1-232ENST00000418800 CTAGE6Q86UF2 777 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 CTAGE4Q8IX94 777 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 RUFY1Q96T51 708 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 NCAPGQ9BPX3 1015 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 ADCY9O60503 1353 aa13.34□□□□□ -0.27
DDR1-232ENST00000418800 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.27
DDR1-232ENST00000418800 KIAA0754O94854 1291 aa13.33□□□□□ -0.27
DDR1-232ENST00000418800 HSPD1P10809 573 aaKnown RBP13.33□□□□□ -0.27
DDR1-232ENST00000418800 ATP2B2Q01814 1243 aa13.33□□□□□ -0.27
DDR1-232ENST00000418800 TSR1Q2NL82 804 aaKnown RBP13.33□□□□□ -0.27
DDR1-232ENST00000418800 NUP88Q99567 741 aaPredicted RBP13.33□□□□□ -0.27
DDR1-232ENST00000418800 FUT8Q9BYC5 575 aa13.33□□□□□ -0.27
DDR1-232ENST00000418800 ARHGAP6O43182 974 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 TDO2P48775 406 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 SF3A3Q12874 501 aaKnown RBP eCLIP13.33□□□□□ -0.289e-7■■■■□ 24.7
DDR1-232ENST00000418800 FBXW10Q5XX13 1052 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 CEP57Q86XR8 500 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 OSBPL5Q9H0X9 879 aaPredicted RBP13.33□□□□□ -0.28
DDR1-232ENST00000418800 FRMD3A2A2Y4 597 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 SOWAHDA6NJG2 315 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 EBAG9O00559 213 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 CCDC175P0C221 793 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 CASP1P29466 404 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 MRPS25P82663 173 aaKnown RBP13.33□□□□□ -0.28
DDR1-232ENST00000418800 SPATA31D1Q6ZQQ2 1576 aa13.33□□□□□ -0.28
DDR1-232ENST00000418800 PI16Q6UXB8 463 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 SMYD4Q8IYR2 804 aaPredicted RBP13.32□□□□□ -0.28
DDR1-232ENST00000418800 AFAP1L1Q8TED9 768 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 RABGGTAQ92696 567 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 SAMSN1Q9NSI8 373 aaKnown RBP13.32□□□□□ -0.28
DDR1-232ENST00000418800 KCNH3Q9ULD8 1083 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 KCNJ14Q9UNX9 436 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 PHLPP2Q6ZVD8 1323 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 IGSF1Q8N6C5 1336 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 IARSP41252 1262 aaKnown RBP13.32□□□□□ -0.28
DDR1-232ENST00000418800 GCKRQ14397 625 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 FILIP1LQ4L180 1135 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 REXO1L1PQ8IX06 675 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 A2ML1A8K2U0 1454 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 SBNO1A3KN83 1393 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 GUCY2CP25092 1073 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 ANKLE2Q86XL3 938 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 VPS37DQ86XT2 251 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 KBTBD3Q8NAB2 608 aa13.32□□□□□ -0.28
DDR1-232ENST00000418800 JPH2Q9BR39 696 aaPredicted RBP13.32□□□□□ -0.28
DDR1-232ENST00000418800 NAP1L1P55209 391 aaKnown RBP13.31□□□□□ -0.28
DDR1-232ENST00000418800 TMEM2Q9UHN6 1383 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 SHTN1A0MZ66 631 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 GOLGA8AA7E2F4 631 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 ENC1O14682 589 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 RNMTO43148 476 aaKnown RBP13.31□□□□□ -0.28
DDR1-232ENST00000418800 ENGASEQ8NFI3 743 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 CDC5LQ99459 802 aaKnown RBP13.31□□□□□ -0.28
DDR1-232ENST00000418800 VPS16Q9H269 839 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 INCENPQ9NQS7 918 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 PPLO60437 1756 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 CTAGE9A4FU28 777 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 CCDC151A5D8V7 595 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 KIF28PB7ZC32 967 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 RNF40O75150 1001 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 ATP5JP18859 108 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 CASP8Q14790 479 aa13.31□□□□□ -0.28
DDR1-232ENST00000418800 GSPT2Q8IYD1 628 aaKnown RBP13.31□□□□□ -0.28
DDR1-232ENST00000418800 LLPHQ9BRT6 129 aaKnown RBP13.31□□□□□ -0.28
DDR1-232ENST00000418800 FER1L4A9Z1Z3 1794 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 B4E1Z4 1266 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 UBE2Q2LH0YL09 131 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 N4BP3O15049 544 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 IGKV5-2P06315 115 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 KRT40Q6A162 431 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 RBM43Q6ZSC3 357 aaKnown RBP13.3□□□□□ -0.28
DDR1-232ENST00000418800 IGSF22Q8N9C0 903 aa13.3□□□□□ -0.28
DDR1-232ENST00000418800 STRN4Q9NRL3 753 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms