RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 CCDC171Q6TFL3 1326 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 TSHZ2Q9NRE2 1034 aa19.34■□□□□ 0.69
SYNGAP1-202ENST00000418600 USP17L8P0C7I0 530 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 CACNA2D4Q7Z3S7 1137 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 DIP2BQ9P265 1576 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 KRT2P35908 639 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 KLHDC4Q8TBB5 520 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 ALG1Q9BT22 464 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 MYO3BQ8WXR4 1341 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 KDRP35968 1356 aa19.33■□□□□ 0.69
SYNGAP1-202ENST00000418600 CHL1O00533 1208 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 CHMP2AO43633 222 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 CLIP2Q9UDT6 1046 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 CNPY2Q9Y2B0 182 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 COL15A1P39059 1388 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 AATKQ6ZMQ8 1374 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 BMP15O95972 392 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 JAKMIP3Q5VZ66 844 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 FERMT3Q86UX7 667 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 GLI2P10070 1586 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 KRT26Q7Z3Y9 468 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 APOBEC3FQ8IUX4 373 aaKnown RBP19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 IL17REQ8NFR9 667 aa19.33■□□□□ 0.68
SYNGAP1-202ENST00000418600 ALAS1P13196 640 aa19.32■□□□□ 0.68
SYNGAP1-202ENST00000418600 ABCB5Q2M3G0 1257 aa19.32■□□□□ 0.68
SYNGAP1-202ENST00000418600 CDAN1Q8IWY9 1227 aa19.32■□□□□ 0.68
SYNGAP1-202ENST00000418600 ARHGEF1Q92888 912 aaKnown RBP19.32■□□□□ 0.68
SYNGAP1-202ENST00000418600 DPH6Q7L8W6 267 aa19.32■□□□□ 0.68
SYNGAP1-202ENST00000418600 COA7Q96BR5 231 aa19.32■□□□□ 0.68
SYNGAP1-202ENST00000418600 A0A0G2JLW4 131 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 SMTNL1A8MU46 457 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 KRT79Q5XKE5 535 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 KLHL10Q6JEL2 608 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 BRF1Q92994 677 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 AOC3Q16853 763 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 DEFB132Q7Z7B7 95 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 RBM8AQ9Y5S9 174 aaKnown RBP19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 PALM3A6NDB9 673 aaPredicted RBP19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 CFBP00751 764 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 HEG1Q9ULI3 1381 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 CLEC4GQ6UXB4 293 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 BARGINQ6ZT62 677 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 CNNM3Q8NE01 707 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 GLG1Q92896 1179 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 IFT74Q96LB3 600 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 FAM193BQ96PV7 902 aaPredicted RBP19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 LRRC2Q9BYS8 371 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 CEP170BQ9Y4F5 1589 aaPredicted RBP19.31■□□□□ 0.68
SYNGAP1-202ENST00000418600 DDX39AO00148 427 aaKnown RBP19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 CCDC192P0DO97 292 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 UBE4AQ14139 1066 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 PABPN1LA6NDY0 278 aaKnown RBP19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 KCNQ2O43526 872 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 SLC16A10Q8TF71 515 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 ZMYND15Q9H091 742 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 TSPY26PQ9H489 355 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 PPFIA3O75145 1194 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 ICA1Q05084 483 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 TRPC6Q9Y210 931 aa19.3■□□□□ 0.68
SYNGAP1-202ENST00000418600 STAT6P42226 847 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 RBM25P49756 843 aaKnown RBP19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 ECE2O60344 883 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 MCF2L2Q86YR7 1114 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 DBNDD2Q9BQY9 259 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 LRFN2Q9ULH4 789 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 COA1Q9GZY4 146 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 PARD3Q8TEW0 1356 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 SLC15A2Q16348 729 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 GREM2Q9H772 168 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 SPATA31A5Q5VU36 1347 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 SPATA31A7Q8IWB4 1347 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 Q6ZUG5 572 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 FERMT1Q9BQL6 677 aa19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 CWC15Q9P013 229 aaKnown RBP19.29■□□□□ 0.68
SYNGAP1-202ENST00000418600 EPB41L2O43491 1005 aaKnown RBP19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 CEP85Q6P2H3 762 aa19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 RSPH3Q86UC2 560 aa19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 STRN3Q13033 797 aa19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 LARP6Q9BRS8 491 aaKnown RBP19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 TRIM75PA6NK02 468 aa19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 PDE1AP54750 535 aa19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 ZNF532Q9HCE3 1301 aa19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 NOP2P46087 812 aaKnown RBP19.28■□□□□ 0.68
SYNGAP1-202ENST00000418600 SEMA3EO15041 775 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 SDSP20132 328 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 FAM114A1Q8IWE2 563 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 APPBP2Q92624 585 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 LRRC45Q96CN5 670 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 HARSP12081 509 aaKnown RBP19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 RNF169Q8NCN4 708 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 NUP62CLQ9H1M0 184 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 ZAP70P43403 619 aa19.27■□□□□ 0.68
SYNGAP1-202ENST00000418600 ATG3Q9NT62 314 aa19.27■□□□□ 0.67
SYNGAP1-202ENST00000418600 PRDM1O75626 825 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 SMTNP53814 917 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 ZNF157P51786 506 aaPredicted RBP19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 MAP7D2Q96T17 732 aa19.26■□□□□ 0.67
SYNGAP1-202ENST00000418600 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms