RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 GRAMD1CQ8IYS0 662 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 NAPBQ9H115 298 aa13.76□□□□□ -0.21
LIMK1-202ENST00000418310 STARD3NLO95772 234 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 CDC25BP30305 580 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 GRIN1Q05586 938 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 NLRP10Q86W26 655 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 POLR3EQ9NVU0 708 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 RIPOR2Q9Y4F9 1068 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 TMEM232C9JQI7 657 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 YEATS4O95619 227 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 CTSWP56202 376 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 FANCCQ00597 558 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 SHC4Q6S5L8 630 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 TRMT44Q8IYL2 757 aaKnown RBP13.75□□□□□ -0.21
LIMK1-202ENST00000418310 SEC31BQ9NQW1 1179 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 BTBD18B2RXH4 712 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 CPLX2Q6PUV4 134 aaKnown RBP13.75□□□□□ -0.21
LIMK1-202ENST00000418310 SMAP1Q8IYB5 467 aaPredicted RBP13.75□□□□□ -0.21
LIMK1-202ENST00000418310 PAXBP1Q9Y5B6 917 aa13.75□□□□□ -0.21
LIMK1-202ENST00000418310 RANBP6O60518 1105 aaKnown RBP13.74□□□□□ -0.21
LIMK1-202ENST00000418310 ZSCAN20P17040 1043 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-202ENST00000418310 TDO2P48775 406 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 TPM4P67936 248 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 BRAPQ7Z569 592 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 CAMTA1Q9Y6Y1 1673 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 A0A1W2PQ27 194 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 A0A1W2PQ64 194 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 A0A1W2PQD8 194 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 MINDY4BA8MYZ0 360 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 NLRP12P59046 1061 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 LONRF3Q496Y0 759 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 E4F1Q66K89 784 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-202ENST00000418310 CNNM3Q8NE01 707 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 ABCF2Q9UG63 623 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 SLC12A7Q9Y666 1083 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 SH2B2O14492 632 aaPredicted RBP13.74□□□□□ -0.21
LIMK1-202ENST00000418310 UBASH3AP57075 661 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 ATL3Q6DD88 541 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 GIGYF2Q6Y7W6 1299 aaKnown RBP13.74□□□□□ -0.21
LIMK1-202ENST00000418310 KIF18AQ8NI77 898 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 ZSWIM5Q9P217 1185 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 PRDM4Q9UKN5 801 aa13.74□□□□□ -0.21
LIMK1-202ENST00000418310 NR5A1Q13285 461 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 BTG4Q9NY30 223 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 ADAMTS7Q9UKP4 1686 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 ZMYM6O95789 1325 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 MAP3K15Q6ZN16 1313 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 PDE8BO95263 885 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 SLC39A14Q15043 492 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 SLC4A9Q96Q91 983 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
LIMK1-202ENST00000418310 FANCLQ9NW38 375 aa13.73□□□□□ -0.21
LIMK1-202ENST00000418310 BCAMP50895 628 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 NCAPHQ15003 741 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 PPP1R13BQ96KQ4 1090 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 MPHOSPH8Q99549 860 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 DNAI1Q9UI46 699 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 RIC1Q4ADV7 1423 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 ALS2Q96Q42 1657 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
LIMK1-202ENST00000418310 COBLO75128 1261 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 CMA1P23946 247 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 RASGRF1Q13972 1273 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 ERCC6LQ2NKX8 1250 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 DZIP3Q86Y13 1208 aaKnown RBP13.72□□□□□ -0.21
LIMK1-202ENST00000418310 CREBRFQ8IUR6 639 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 ACSBG1Q96GR2 724 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 UTP14AQ9BVJ6 771 aaKnown RBP13.72□□□□□ -0.21
LIMK1-202ENST00000418310 PCDHA5Q9Y5H7 936 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 TACC3Q9Y6A5 838 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 UBN2Q6ZU65 1347 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 CSF1RP07333 972 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 CASP1P29466 404 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 RBM6P78332 1123 aaKnown RBP13.72□□□□□ -0.21
LIMK1-202ENST00000418310 SDR42E1Q8WUS8 393 aa13.72□□□□□ -0.21
LIMK1-202ENST00000418310 NEMFO60524 1076 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 PRDM1O75626 825 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 PDE4BQ07343 736 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 KLHL10Q6JEL2 608 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 NYAP1Q6ZVC0 841 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 ST7Q9NRC1 585 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.21
LIMK1-202ENST00000418310 EVCP57679 992 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 GSDMDP57764 484 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 KMT5BQ4FZB7 885 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 FOXP4Q8IVH2 680 aaPredicted RBP13.71□□□□□ -0.21
LIMK1-202ENST00000418310 DIS3L2Q8IYB7 885 aaKnown RBP13.71□□□□□ -0.21
LIMK1-202ENST00000418310 IFNL3Q8IZI9 196 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 LCORLQ8N3X6 602 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.71□□□□□ -0.21
LIMK1-202ENST00000418310 STRBPQ96SI9 672 aaKnown RBP13.71□□□□□ -0.21
LIMK1-202ENST00000418310 CARD10Q9BWT7 1032 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 SLC4A4Q9Y6R1 1079 aa13.71□□□□□ -0.21
LIMK1-202ENST00000418310 SSRP1Q08945 709 aaKnown RBP13.71□□□□□ -0.22
LIMK1-202ENST00000418310 FBXO38Q6PIJ6 1188 aa13.71□□□□□ -0.22
LIMK1-202ENST00000418310 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.22
LIMK1-202ENST00000418310 LY9Q9HBG7 655 aa13.71□□□□□ -0.22
LIMK1-202ENST00000418310 LRP2BPQ9P2M1 347 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms