RNA–Protein interactions for RNA: ENST00000417633.1

SYNC-203, Transcript of syncoilin, intermediate filament protein, humanhuman

TSL 4

Gene SYNC, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-203ENST00000417633 NOL10Q9BSC4 688 aaKnown RBP13.9□□□□□ -0.18
SYNC-203ENST00000417633 IL25Q9H293 177 aa13.9□□□□□ -0.18
SYNC-203ENST00000417633 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
SYNC-203ENST00000417633 AATFQ9NY61 560 aaKnown RBP eCLIP13.9□□□□□ -0.18
SYNC-203ENST00000417633 CCDC171Q6TFL3 1326 aa13.9□□□□□ -0.19
SYNC-203ENST00000417633 EIF5BO60841 1220 aaKnown RBP13.89□□□□□ -0.19
SYNC-203ENST00000417633 MBD4O95243 580 aa13.89□□□□□ -0.19
SYNC-203ENST00000417633 LMOD1P29536 600 aaPredicted RBP13.89□□□□□ -0.19
SYNC-203ENST00000417633 EPS15P42566 896 aa13.89□□□□□ -0.19
SYNC-203ENST00000417633 RBM5P52756 815 aaKnown RBP eCLIP13.89□□□□□ -0.19
SYNC-203ENST00000417633 RHBDL3P58872 404 aa13.89□□□□□ -0.19
SYNC-203ENST00000417633 DYNLL1P63167 89 aaKnown RBP13.89□□□□□ -0.19
SYNC-203ENST00000417633 ZNF589Q86UQ0 364 aaPredicted RBP13.89□□□□□ -0.19
SYNC-203ENST00000417633 LCORLQ8N3X6 602 aa13.89□□□□□ -0.19
SYNC-203ENST00000417633 PRMT6Q96LA8 375 aaPredicted RBP13.89□□□□□ -0.19
SYNC-203ENST00000417633 PCDHAC2Q9Y5I4 1007 aa13.89□□□□□ -0.19
SYNC-203ENST00000417633 WDR90Q96KV7 1748 aa13.89□□□□□ -0.19
SYNC-203ENST00000417633 SCN4AP35499 1836 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 RPAP1Q9BWH6 1393 aaPredicted RBP13.88□□□□□ -0.19
SYNC-203ENST00000417633 POTECB2RU33 542 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 WNT10BO00744 389 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 GNAT2P19087 354 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 CCDC129Q6ZRS4 1044 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 SAMD7Q7Z3H4 446 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 ARMT1Q9H993 441 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 ADARB2Q9NS39 739 aaKnown RBP13.88□□□□□ -0.19
SYNC-203ENST00000417633 HACL1Q9UJ83 578 aa13.88□□□□□ -0.19
SYNC-203ENST00000417633 ADAMTSL1Q8N6G6 1762 aa13.87□□□□□ -0.19
SYNC-203ENST00000417633 IQCA1LA6NCM1 817 aa13.87□□□□□ -0.19
SYNC-203ENST00000417633 PATL2C9JE40 543 aaKnown RBP13.87□□□□□ -0.19
SYNC-203ENST00000417633 EPB41L2O43491 1005 aaKnown RBP13.87□□□□□ -0.19
SYNC-203ENST00000417633 NPM3O75607 178 aaKnown RBP13.87□□□□□ -0.19
SYNC-203ENST00000417633 KIF4BQ2VIQ3 1234 aa13.87□□□□□ -0.19
SYNC-203ENST00000417633 CDC42EP5Q6NZY7 148 aa13.87□□□□□ -0.19
SYNC-203ENST00000417633 SH3RF3Q8TEJ3 882 aaPredicted RBP13.87□□□□□ -0.19
SYNC-203ENST00000417633 DSCC1Q9BVC3 393 aa13.87□□□□□ -0.19
SYNC-203ENST00000417633 CRNKL1Q9BZJ0 848 aaKnown RBP13.87□□□□□ -0.19
SYNC-203ENST00000417633 USP40Q9NVE5 1235 aa13.87□□□□□ -0.19
SYNC-203ENST00000417633 GSG1L2A8MUP6 293 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 EGFRP00533 1210 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 HSPD1P10809 573 aaKnown RBP13.86□□□□□ -0.19
SYNC-203ENST00000417633 ALX1Q15699 326 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 SPDYE2Q495Y8 402 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 TBC1D10BQ4KMP7 808 aaPredicted RBP13.86□□□□□ -0.19
SYNC-203ENST00000417633 FKBP1CQ5VVH2 108 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 GIMAP6Q6P9H5 292 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 KIAA1211Q6ZU35 1233 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 USP50Q70EL3 339 aaPredicted RBP13.86□□□□□ -0.19
SYNC-203ENST00000417633 TRPM4Q8TD43 1214 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 IDI2Q9BXS1 227 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 BACH2Q9BYV9 841 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 TDRD3Q9H7E2 651 aaKnown RBP13.86□□□□□ -0.19
SYNC-203ENST00000417633 ATP8A2Q9NTI2 1148 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 MKRN1Q9UHC7 482 aaKnown RBP13.86□□□□□ -0.19
SYNC-203ENST00000417633 SLC4A4Q9Y6R1 1079 aa13.86□□□□□ -0.19
SYNC-203ENST00000417633 FOXP2O15409 715 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 PRKAB2O43741 272 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 MYO1BO43795 1136 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 WDHD1O75717 1129 aaPredicted RBP13.85□□□□□ -0.19
SYNC-203ENST00000417633 REC8O95072 547 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 EPHX2P34913 555 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 HIRAP54198 1017 aaPredicted RBP13.85□□□□□ -0.19
SYNC-203ENST00000417633 NBPF9Q3BBW0 867 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 RBM26Q5T8P6 1007 aaKnown RBP13.85□□□□□ -0.19
SYNC-203ENST00000417633 VPS53Q5VIR6 699 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 TEX11Q8IYF3 940 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 MAP4K1Q92918 833 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 LSG1Q9H089 658 aaKnown RBP13.85□□□□□ -0.19
SYNC-203ENST00000417633 TAF1DQ9H5J8 278 aaPredicted RBP13.85□□□□□ -0.19
SYNC-203ENST00000417633 ZNF70Q9UC06 446 aaPredicted RBP13.85□□□□□ -0.19
SYNC-203ENST00000417633 ECM29Q5VYK3 1845 aa13.85□□□□□ -0.19
SYNC-203ENST00000417633 CDK5RAP2Q96SN8 1893 aa13.84□□□□□ -0.19
SYNC-203ENST00000417633 VEGFAP15692 232 aaPredicted RBP13.84□□□□□ -0.19
SYNC-203ENST00000417633 PTH1RQ03431 593 aa13.84□□□□□ -0.19
SYNC-203ENST00000417633 IFNL3Q8IZI9 196 aa13.84□□□□□ -0.19
SYNC-203ENST00000417633 TGFBRAP1Q8WUH2 860 aa13.84□□□□□ -0.19
SYNC-203ENST00000417633 DCP1AQ9NPI6 582 aaPredicted RBP13.84□□□□□ -0.19
SYNC-203ENST00000417633 ZMYM6O95789 1325 aa13.84□□□□□ -0.19
SYNC-203ENST00000417633 FOCADQ5VW36 1801 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 ENTPD3O75355 529 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 SEC24BO95487 1268 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 USP5P45974 858 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 PNMA8AQ86V59 439 aaPredicted RBP13.83□□□□□ -0.2
SYNC-203ENST00000417633 ZC3H15Q8WU90 426 aaKnown RBP13.83□□□□□ -0.2
SYNC-203ENST00000417633 SDR42E1Q8WUS8 393 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 USP26Q9BXU7 913 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 NACAP1Q9BZK3 213 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 TMOD2Q9NZR1 351 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 PGAP2Q9UHJ9 254 aa13.83□□□□□ -0.2
SYNC-203ENST00000417633 CLRN2A0PK11 232 aa13.82□□□□□ -0.2
SYNC-203ENST00000417633 FGAP02671 866 aa13.82□□□□□ -0.2
SYNC-203ENST00000417633 NFIAQ12857 509 aa13.82□□□□□ -0.2
SYNC-203ENST00000417633 FAM83AQ86UY5 434 aa13.82□□□□□ -0.2
SYNC-203ENST00000417633 RRAGCQ9HB90 399 aa13.82□□□□□ -0.2
SYNC-203ENST00000417633 EPB41L4AQ9HCS5 686 aaPredicted RBP13.82□□□□□ -0.2
SYNC-203ENST00000417633 DDX4Q9NQI0 724 aaKnown RBP13.82□□□□□ -0.2
SYNC-203ENST00000417633 FAM198AQ9UFP1 575 aa13.82□□□□□ -0.2
SYNC-203ENST00000417633 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
SYNC-203ENST00000417633 FLT1P17948 1338 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms