RNA–Protein interactions for RNA: ENST00000417470.1

COMMD3-BMI1-201, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 5

Gene COMMD3-BMI1, Length 745 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-201ENST00000417470 FAM83AQ86UY5 434 aa21.28■■□□□ 1
COMMD3-BMI1-201ENST00000417470 DEFB129Q9H1M3 183 aa21.28■■□□□ 1
COMMD3-BMI1-201ENST00000417470 TMOD2Q9NZR1 351 aa21.28■■□□□ 1
COMMD3-BMI1-201ENST00000417470 BTDP43251 543 aa21.27■■□□□ 1
COMMD3-BMI1-201ENST00000417470 IDI2Q9BXS1 227 aa21.27■■□□□ 1
COMMD3-BMI1-201ENST00000417470 VEZTQ9HBM0 779 aa21.27■■□□□ 1
COMMD3-BMI1-201ENST00000417470 USP40Q9NVE5 1235 aa21.27■■□□□ 1
COMMD3-BMI1-201ENST00000417470 MYH2Q9UKX2 1941 aa21.27■■□□□ 1
COMMD3-BMI1-201ENST00000417470 TMEM88BA6NKF7 163 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 NPM3O75607 178 aaKnown RBP21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 BAG3O95817 575 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TNNI2P48788 182 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 RHBDL3P58872 404 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CST9Q5W186 159 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TSHZ3Q63HK5 1081 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CERS3Q8IU89 383 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 EDC3Q96F86 508 aaKnown RBP21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CDCA5Q96FF9 252 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CREBZFQ9NS37 354 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 DOCK2Q92608 1830 aa21.26■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 RASA3Q14644 834 aa21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CENPQQ7L2Z9 268 aaPredicted RBP21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TICAM2Q86XR7 235 aa21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 PLEKHM2Q8IWE5 1019 aa21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 MAGEB6Q8N7X4 407 aa21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 KBTBD3Q8NAB2 608 aa21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.25■□□□□ 0.994e-6■□□□□ 11.1
COMMD3-BMI1-201ENST00000417470 MAST2Q6P0Q8 1798 aa21.25■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 PLCG2P16885 1265 aa21.24■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CYP7A1P22680 504 aa21.24■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 FMR1Q06787 632 aaKnown RBP eCLIP21.24■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 SLC9C2Q5TAH2 1124 aa21.24■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 ZSCAN25Q6NSZ9 544 aa21.24■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 ADGRA1Q86SQ6 560 aa21.24■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TCRBV5S4A2TA0A5A2 114 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CELF2O95319 508 aaKnown RBP21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 PDE6AP16499 860 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 ADD2P35612 726 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 FKBP1BP68106 108 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 UBE3CQ15386 1083 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 DLK2Q6UY11 383 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 FAM151AQ8WW52 585 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 NOL10Q9BSC4 688 aaKnown RBP21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 SCAF8Q9UPN6 1271 aaKnown RBP21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 MYO5AQ9Y4I1 1855 aaKnown RBP21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CNTNAP1P78357 1384 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 RFX7Q2KHR2 1363 aa21.23■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TCP10L2B9ZVM9 353 aa21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 ENTPD3O75355 529 aa21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 WDHD1O75717 1129 aaPredicted RBP21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 SUPT20HL1Q3ZLR7 823 aa21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TEPSINQ96N21 525 aa21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 FAM198AQ9UFP1 575 aa21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 TRPM7Q96QT4 1865 aa21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 RPAP1Q9BWH6 1393 aaPredicted RBP21.22■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 NF2P35240 595 aa21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CACNB3P54284 484 aa21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 NFIAQ12857 509 aa21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 LRRFIP1Q32MZ4 808 aaKnown RBP21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 CCDC136Q96JN2 1154 aa21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 AATFQ9NY61 560 aaKnown RBP eCLIP21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 ZNF532Q9HCE3 1301 aa21.21■□□□□ 0.99
COMMD3-BMI1-201ENST00000417470 ZFYP08048 801 aaPredicted RBP21.2■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 PDE4AP27815 886 aa21.2■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 EVI5LQ96CN4 794 aa21.2■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 PRAMEF18Q5VWM3 479 aa21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 C2orf69Q8N8R5 385 aa21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 HHIPL1Q96JK4 782 aa21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 RIOK1Q9BRS2 568 aaKnown RBP21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 TMEM39BQ9GZU3 492 aa21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 GBA2Q9HCG7 927 aaPredicted RBP21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 TLL2Q9Y6L7 1015 aa21.19■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 RGS3P49796 1198 aa21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 NBPF12Q5TAG4 269 aaPredicted RBP21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 TEX11Q8IYF3 940 aa21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 SH3RF3Q8TEJ3 882 aaPredicted RBP21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 HOOK2Q96ED9 719 aa21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 ZNF408Q9H9D4 720 aa21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 PPP4R2Q9NY27 417 aa21.18■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 UNCXA6NJT0 531 aa21.17■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 MAP3K11Q16584 847 aa21.17■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 SAPCD2Q86UD0 394 aa21.17■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 DDX4Q9NQI0 724 aaKnown RBP21.17■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 COL2A1P02458 1487 aaPredicted RBP21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 MAGEB6P1A0A0J9YX57 407 aa21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 RASSF10A6NK89 507 aa21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 RNF113AO15541 343 aaKnown RBP21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 PPP1R12BO60237 982 aaPredicted RBP21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 DYNLL1P63167 89 aaKnown RBP21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 MIGA1Q8NAN2 632 aa21.16■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 ATRNL1Q5VV63 1379 aa21.15■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 TCP10Q12799 353 aa21.15■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 APPBP2Q92624 585 aa21.15■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 OSBPL5Q9H0X9 879 aaPredicted RBP21.15■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 SSC5DA1L4H1 1573 aa21.14■□□□□ 0.98
COMMD3-BMI1-201ENST00000417470 MAP3K10Q02779 954 aa21.14■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 ARMC9Q7Z3E5 817 aa21.14■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 FSD1Q9BTV5 496 aa21.14■□□□□ 0.97
COMMD3-BMI1-201ENST00000417470 PAPPA2Q9BXP8 1791 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms