RNA–Protein interactions for RNA: ENST00000416918.5

TRAPPC12-205, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 473 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-205ENST00000416918 RIOK1Q9BRS2 568 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-205ENST00000416918 NOL10Q9BSC4 688 aaKnown RBP12.92□□□□□ -0.34
TRAPPC12-205ENST00000416918 DUOX1Q9NRD9 1551 aa12.92□□□□□ -0.34
TRAPPC12-205ENST00000416918 SUGT1Q9Y2Z0 365 aa12.92□□□□□ -0.34
TRAPPC12-205ENST00000416918 NID2Q14112 1375 aa12.92□□□□□ -0.34
TRAPPC12-205ENST00000416918 CCDC69A6NI79 296 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 ZBTB43O43298 467 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 CALM1P0DP23 149 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 CALM2P0DP24 149 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 CALM3P0DP25 149 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 XRCC6P12956 609 aaKnown RBP eCLIP12.91□□□□□ -0.343e-7■□□□□ 10.3
TRAPPC12-205ENST00000416918 PLCG2P16885 1265 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 ALDH1B1P30837 517 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 ANTXR2P58335 489 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 DNM1Q05193 864 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 PPARAQ07869 468 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 TMEM67Q5HYA8 995 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 TBC1D10CQ8IV04 446 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 SP8Q8IXZ3 490 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 IGDCC4Q8TDY8 1250 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 NSUN4Q96CB9 384 aaKnown RBP12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 ZNF287Q9HBT7 754 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 CNPY2Q9Y2B0 182 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 SLC12A7Q9Y666 1083 aa12.91□□□□□ -0.34
TRAPPC12-205ENST00000416918 STK36Q9NRP7 1315 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 IRS2Q9Y4H2 1338 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 SNAP23O00161 211 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 IFIT3O14879 490 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 LDHBP07195 334 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 RXRBP28702 533 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 PDE6BP35913 854 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 METAP2P50579 478 aaKnown RBP eCLIP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 PPP4CP60510 307 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 RESTQ13127 1097 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 UVSSAQ2YD98 709 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 APOA5Q6Q788 366 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 NFXL1Q6ZNB6 911 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 CDC37L1Q7L3B6 337 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 LCORLQ8N3X6 602 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 C8orf76Q96K31 380 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 SPATA32Q96LK8 384 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 UBAC1Q9BSL1 405 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 LRRC2Q9BYS8 371 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 NBPF3Q9H094 633 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 EPB41L4AQ9HCS5 686 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 DDX19AQ9NUU7 478 aaKnown RBP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 ORC3Q9UBD5 711 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 ARPP21Q9UBL0 812 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 TAOK2Q9UL54 1235 aa12.9□□□□□ -0.34
TRAPPC12-205ENST00000416918 POLRMTO00411 1230 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 ORC4O43929 436 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 JAK2O60674 1132 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 CTDNEP1O95476 244 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 CAVIN2O95810 425 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 IL1R1P14778 569 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 MECOMQ03112 1051 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 PDE4BQ07343 736 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 TRIM29Q14134 588 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 IQCA1Q86XH1 822 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 DZIP1Q86YF9 867 aaKnown RBP12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 TRIM22Q8IYM9 498 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 FBXO18Q8NFZ0 1043 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 FAM163AQ96GL9 167 aaPredicted RBP12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 TFCP2L1Q9NZI6 479 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 ZSWIM5Q9P217 1185 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 HPS5Q9UPZ3 1129 aa12.89□□□□□ -0.35
TRAPPC12-205ENST00000416918 B4E1Z4 1266 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 FIBPO43427 364 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 KDM4AO75164 1064 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 NPR1P16066 1061 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 IFNAR1P17181 557 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 NASPP49321 788 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 CCT2P78371 535 aaKnown RBP12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 CCDC173Q0VFZ6 552 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 WTAPQ15007 396 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 LEO1Q8WVC0 666 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 AKT1S1Q96B36 256 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 DDX11Q96FC9 970 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 TSPY26PQ9H489 355 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 LY9Q9HBG7 655 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 TMEM63CQ9P1W3 806 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 BRPF3Q9ULD4 1205 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 C4AP0C0L4 1744 aa12.88□□□□□ -0.35
TRAPPC12-205ENST00000416918 UBR3Q6ZT12 1888 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 CTAGE5O15320 804 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 APBA3O96018 575 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 XBP1P17861 261 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 IARSP41252 1262 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 COL9A3Q14050 684 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 GRIPAP1Q4V328 841 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 CYB5R4Q7L1T6 521 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 AMIGO3Q86WK7 504 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 FAM177A1Q8N128 213 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 MIGA1Q8NAN2 632 aa12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 RBM28Q9NW13 759 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 RBM27Q9P2N5 1060 aaKnown RBP12.87□□□□□ -0.35
TRAPPC12-205ENST00000416918 ATP6V0A2Q9Y487 856 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms