RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 USP26Q9BXU7 913 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 LSG1Q9H089 658 aaKnown RBP10.04□□□□□ -0.8
RBM39-208ENST00000416108 IL25Q9H293 177 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 GAKO14976 1311 aa10.04□□□□□ -0.8
RBM39-208ENST00000416108 SCN4AP35499 1836 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 GPR75-ASB3A0A0A6YYF3 556 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 PATL2C9JE40 543 aaKnown RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 USP17L8P0C7I0 530 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 HSPD1P10809 573 aaKnown RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 ZKSCAN1P17029 563 aaPredicted RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 MMP14P50281 582 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 DYNLL1P63167 89 aaKnown RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 PTH1RQ03431 593 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 C9orf131Q5VYM1 1079 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 ADGRA1Q86SQ6 560 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 TEX11Q8IYF3 940 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 FAM163AQ96GL9 167 aaPredicted RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 STRBPQ96SI9 672 aaKnown RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 MRIQ9BWK5 157 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 NAPBQ9H115 298 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 TMOD2Q9NZR1 351 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 SERPINA10Q9UK55 444 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 ZBTB12Q9Y330 459 aaPredicted RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 DAGLAQ9Y4D2 1042 aa10.03□□□□□ -0.8
RBM39-208ENST00000416108 RBM8AQ9Y5S9 174 aaKnown RBP10.03□□□□□ -0.8
RBM39-208ENST00000416108 MYO1BO43795 1136 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 LMOD1P29536 600 aaPredicted RBP10.02□□□□□ -0.81
RBM39-208ENST00000416108 PRELPP51888 382 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 PPP4CP60510 307 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 DLGAP5Q15398 846 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 IMMTQ16891 758 aaKnown RBP10.02□□□□□ -0.81
RBM39-208ENST00000416108 CFAP100Q494V2 611 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 DPY19L2Q6NUT2 758 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 GPC2Q8N158 579 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 ZNF384Q8TF68 577 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 MAP4K1Q92918 833 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 ZDHHC15Q96MV8 337 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 RIOK1Q9BRS2 568 aaKnown RBP10.02□□□□□ -0.81
RBM39-208ENST00000416108 POLR2AP24928 1970 aaKnown RBP10.02□□□□□ -0.81
RBM39-208ENST00000416108 ZNF541Q9H0D2 1346 aa10.02□□□□□ -0.81
RBM39-208ENST00000416108 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
RBM39-208ENST00000416108 DDX60LQ5H9U9 1706 aaKnown RBP10.02□□□□□ -0.81
RBM39-208ENST00000416108 H7C1D1 291 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 HSPA4P34932 840 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 RBM25P49756 843 aaKnown RBP10.01□□□□□ -0.81
RBM39-208ENST00000416108 GMPSP49915 693 aaPredicted RBP10.01□□□□□ -0.81
RBM39-208ENST00000416108 VPS53Q5VIR6 699 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 IFNL3Q8IZI9 196 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 SH3RF3Q8TEJ3 882 aaPredicted RBP10.01□□□□□ -0.81
RBM39-208ENST00000416108 SDR42E1Q8WUS8 393 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 TBC1D32Q96NH3 1257 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 ATP8A2Q9NTI2 1148 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 USP40Q9NVE5 1235 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 ZMYM6O95789 1325 aa10.01□□□□□ -0.81
RBM39-208ENST00000416108 ZNF213O14771 459 aa10□□□□□ -0.81
RBM39-208ENST00000416108 PRKAB2O43741 272 aa10□□□□□ -0.81
RBM39-208ENST00000416108 SLC3A2P08195 630 aaKnown RBP10□□□□□ -0.81
RBM39-208ENST00000416108 ANP32AP39687 249 aaKnown RBP10□□□□□ -0.81
RBM39-208ENST00000416108 ANAPC15P60006 121 aa10□□□□□ -0.81
RBM39-208ENST00000416108 KRT32Q14532 448 aa10□□□□□ -0.81
RBM39-208ENST00000416108 ALX1Q15699 326 aa10□□□□□ -0.81
RBM39-208ENST00000416108 CREB3L3Q68CJ9 461 aa10□□□□□ -0.81
RBM39-208ENST00000416108 GIMAP6Q6P9H5 292 aa10□□□□□ -0.81
RBM39-208ENST00000416108 MICALL2Q8IY33 904 aa10□□□□□ -0.81
RBM39-208ENST00000416108 TGFBRAP1Q8WUH2 860 aa10□□□□□ -0.81
RBM39-208ENST00000416108 DPF2Q92785 391 aa10□□□□□ -0.81
RBM39-208ENST00000416108 GMLQ99445 158 aa10□□□□□ -0.81
RBM39-208ENST00000416108 TSHZ2Q9NRE2 1034 aa10□□□□□ -0.81
RBM39-208ENST00000416108 ARPP21Q9UBL0 812 aaPredicted RBP10□□□□□ -0.81
RBM39-208ENST00000416108 CNOT7Q9UIV1 285 aaKnown RBP10□□□□□ -0.81
RBM39-208ENST00000416108 GSG1L2A8MUP6 293 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 MINDY4BA8MYZ0 360 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 SLC27A2O14975 620 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 FGAP02671 866 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 POLR3DP05423 398 aaPredicted RBP9.99□□□□□ -0.81
RBM39-208ENST00000416108 PICALMQ13492 652 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 MAPKAPK5Q8IW41 473 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 MYOZ2Q9NPC6 264 aa9.99□□□□□ -0.81
RBM39-208ENST00000416108 SPDYE2BA6NHP3 402 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 SPDYE6P0CI01 402 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 PSMA5P28066 241 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 TNNI2P48788 182 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 ZNF280AP59817 542 aaPredicted RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 HAND2P61296 217 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 TRDNQ13061 729 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 NECTIN1Q15223 517 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 KIF4BQ2VIQ3 1234 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 RBM26Q5T8P6 1007 aaKnown RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 APOBEC3HQ6NTF7 200 aaKnown RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 CDC42EP5Q6NZY7 148 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 RALYLQ86SE5 291 aaKnown RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 MTMR14Q8NCE2 650 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 RNF41Q9H4P4 317 aaPredicted RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 TDRD3Q9H7E2 651 aaKnown RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 VEZTQ9HBM0 779 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 EPB41L4AQ9HCS5 686 aaPredicted RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 DCP1AQ9NPI6 582 aaPredicted RBP9.98□□□□□ -0.81
RBM39-208ENST00000416108 MCM9Q9NXL9 1143 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 GPRC5DQ9NZD1 345 aa9.98□□□□□ -0.81
RBM39-208ENST00000416108 WDR90Q96KV7 1748 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms