RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 RAI14Q9P0K7 980 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.22□□□□□ -0.29
SCN4B-202ENST00000415030 MAGEC2Q9UBF1 373 aaPredicted RBP13.22□□□□□ -0.29
SCN4B-202ENST00000415030 PUF60Q9UHX1 559 aaKnown RBP13.22□□□□□ -0.29
SCN4B-202ENST00000415030 TTF2Q9UNY4 1162 aaKnown RBP13.22□□□□□ -0.29
SCN4B-202ENST00000415030 WDHD1O75717 1129 aaPredicted RBP13.22□□□□□ -0.29
SCN4B-202ENST00000415030 SEC31AO94979 1220 aaKnown RBP13.22□□□□□ -0.29
SCN4B-202ENST00000415030 SLC39A14Q15043 492 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 ZNF569Q5MCW4 686 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 MICU3Q86XE3 530 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 NACAP1Q9BZK3 213 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 LZTFL1Q9NQ48 299 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 H0YHG0 523 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 ENGASEQ8NFI3 743 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 TECPR2O15040 1411 aa13.22□□□□□ -0.29
SCN4B-202ENST00000415030 SHTN1A0MZ66 631 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 TADA3O75528 432 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 HSPD1P10809 573 aaKnown RBP13.21□□□□□ -0.29
SCN4B-202ENST00000415030 HSP90AA4PQ58FG1 418 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 EHBP1Q8NDI1 1231 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 RSPH14Q9UHP6 348 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 PPP6R2O75170 966 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 CC2D1AQ6P1N0 951 aaPredicted RBP13.21□□□□□ -0.29
SCN4B-202ENST00000415030 IPO4Q8TEX9 1081 aaKnown RBP13.21□□□□□ -0.29
SCN4B-202ENST00000415030 NUP88Q99567 741 aaPredicted RBP13.21□□□□□ -0.29
SCN4B-202ENST00000415030 CKAP4Q07065 602 aaKnown RBP13.21□□□□□ -0.29
SCN4B-202ENST00000415030 LONRF2Q1L5Z9 754 aa13.21□□□□□ -0.29
SCN4B-202ENST00000415030 ITSN1Q15811 1721 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 SPATA31D1Q6ZQQ2 1576 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 RAD21O60216 631 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 KIAA0754O94854 1291 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 ACTN2P35609 894 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.3
SCN4B-202ENST00000415030 STIM1Q13586 685 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 ZMYM1Q5SVZ6 1142 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 DDX17Q92841 729 aaKnown RBP13.21□□□□□ -0.3
SCN4B-202ENST00000415030 NDUFB9Q9Y6M9 179 aa13.21□□□□□ -0.3
SCN4B-202ENST00000415030 HMGB2P26583 209 aaKnown RBP13.2□□□□□ -0.3
SCN4B-202ENST00000415030 TTF1Q15361 905 aaPredicted RBP13.2□□□□□ -0.3
SCN4B-202ENST00000415030 TMEM67Q5HYA8 995 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 SRGAP1Q7Z6B7 1085 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 PYM1Q9BRP8 204 aaKnown RBP13.2□□□□□ -0.3
SCN4B-202ENST00000415030 FANCLQ9NW38 375 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 PLEKHG1Q9ULL1 1385 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 BMP15O95972 392 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 GCP02774 474 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 PROSER3Q2NL68 480 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 KIAA1328Q86T90 577 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 AIDAQ96BJ3 306 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 NAPGQ99747 312 aaPredicted RBP13.2□□□□□ -0.3
SCN4B-202ENST00000415030 SLC26A6Q9BXS9 759 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 EFCC1Q9HA90 598 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 RAD51AP2Q09MP3 1159 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 PNOCQ13519 176 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 DDB1Q16531 1140 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 PARD6BQ9BYG5 372 aa13.2□□□□□ -0.3
SCN4B-202ENST00000415030 IFIT3O14879 490 aaKnown RBP13.19□□□□□ -0.3
SCN4B-202ENST00000415030 RRP12Q5JTH9 1297 aaKnown RBP13.19□□□□□ -0.3
SCN4B-202ENST00000415030 ST7Q9NRC1 585 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 ANGEL1Q9UNK9 670 aaKnown RBP13.19□□□□□ -0.3
SCN4B-202ENST00000415030 N4BP3O15049 544 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 MUM1L1Q5H9M0 696 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 KRT40Q6A162 431 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 ZNF790Q6PG37 636 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 IGSF22Q8N9C0 903 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 ACSBG1Q96GR2 724 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 FHOD1Q9Y613 1164 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 DLG5Q8TDM6 1919 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 ZPR1O75312 459 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 PPM1EQ8WY54 764 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 CCDC51Q96ER9 411 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 GPR108Q9NPR9 543 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 CDC23Q9UJX2 597 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 IDH1O75874 414 aaKnown RBP13.19□□□□□ -0.3
SCN4B-202ENST00000415030 RHOXF2BP0C7M4 288 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 POSTNQ15063 836 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 RILPL1Q5EBL4 403 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 IFNL2Q8IZJ0 200 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 RHOXF2Q9BQY4 288 aa13.19□□□□□ -0.3
SCN4B-202ENST00000415030 SLC39A6Q13433 755 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 WHAMMP3Q1A5X7 153 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 TMEM87BQ96K49 555 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 EYA2O00167 538 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 ATP1A3P13637 1013 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 KIF23Q02241 960 aaPredicted RBP13.18□□□□□ -0.3
SCN4B-202ENST00000415030 APPBP2Q92624 585 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 CNNM1Q9NRU3 951 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 BTG4Q9NY30 223 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 TMTC1Q8IUR5 882 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 NAPBQ9H115 298 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 MED4Q9NPJ6 270 aa13.18□□□□□ -0.3
SCN4B-202ENST00000415030 ADKP55263 362 aaKnown RBP13.17□□□□□ -0.3
SCN4B-202ENST00000415030 TIMM10P62072 90 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 TRIM14Q14142 442 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 NCAPD2Q15021 1401 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 FAM71BQ8TC56 605 aa13.17□□□□□ -0.3
SCN4B-202ENST00000415030 NOC3LQ8WTT2 800 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms