RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 TBCELQ5QJ74 424 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 PPP1R26Q5T8A7 1209 aaPredicted RBP6.35□□□□□ -1.39
VPS41-205ENST00000414632 RGL4Q8IZJ4 473 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 MPNDQ8N594 471 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 PNISRQ8TF01 805 aaKnown RBP6.35□□□□□ -1.39
VPS41-205ENST00000414632 SLC16A10Q8TF71 515 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 SCHIP1Q9P0W5 487 aaPredicted RBP6.35□□□□□ -1.39
VPS41-205ENST00000414632 TSPYL4Q9UJ04 414 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 WWC3Q9ULE0 1092 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 USP16Q9Y5T5 823 aa6.35□□□□□ -1.39
VPS41-205ENST00000414632 ANKRD36CQ5JPF3 1778 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 USP42Q9H9J4 1324 aaKnown RBP6.34□□□□□ -1.39
VPS41-205ENST00000414632 A6NJY4 79 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 SIAH2O43255 324 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 STARD3NLO95772 234 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 ITGBL1O95965 494 aaPredicted RBP6.34□□□□□ -1.39
VPS41-205ENST00000414632 MMP10P09238 476 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 GYS1P13807 737 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 TCF3P15923 654 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 MPSTP25325 297 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 EIF4A1P60842 406 aaKnown RBP6.34□□□□□ -1.39
VPS41-205ENST00000414632 FOXK2Q01167 660 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 LMOD3Q0VAK6 560 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 KRT24Q2M2I5 525 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 EAPPQ56P03 285 aaPredicted RBP6.34□□□□□ -1.39
VPS41-205ENST00000414632 USPL1Q5W0Q7 1092 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 PPP1R18Q6NYC8 613 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 C16orf46Q6P387 395 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 CYP2U1Q7Z449 544 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 CCDC116Q8IYX3 515 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 NGEFQ8N5V2 710 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 NLGN2Q8NFZ4 835 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.34□□□□□ -1.39
VPS41-205ENST00000414632 TLL2Q9Y6L7 1015 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 BRCA1P38398 1863 aaKnown RBP6.34□□□□□ -1.39
VPS41-205ENST00000414632 ANKRD31Q8N7Z5 1873 aa6.34□□□□□ -1.39
VPS41-205ENST00000414632 ADH1CP00326 375 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 ANXA1P04083 346 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 SNRPA1P09661 255 aaKnown RBP6.33□□□□□ -1.4
VPS41-205ENST00000414632 MYL6BP14649 208 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 EIF2S2P20042 333 aaKnown RBP6.33□□□□□ -1.4
VPS41-205ENST00000414632 VAMP1P23763 118 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 HMGB2P26583 209 aaKnown RBP6.33□□□□□ -1.4
VPS41-205ENST00000414632 SMTNP53814 917 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 NR5A1Q13285 461 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 NBPF10Q6P3W6 841 aaKnown RBP6.33□□□□□ -1.4
VPS41-205ENST00000414632 BICDL1Q6ZP65 573 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 TMC7Q7Z402 723 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 SLC9A9Q8IVB4 645 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 NBPF15Q8N660 670 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 SYT17Q9BSW7 474 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 C2orf49Q9BVC5 232 aaPredicted RBP6.33□□□□□ -1.4
VPS41-205ENST00000414632 RBCK1Q9BYM8 510 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 BRPF3Q9ULD4 1205 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 COL11A2P13942 1736 aaPredicted RBP6.33□□□□□ -1.4
VPS41-205ENST00000414632 NRXN2Q9P2S2 1712 aa6.33□□□□□ -1.4
VPS41-205ENST00000414632 DLEC1Q9Y238 1755 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 ARFGEF2Q9Y6D5 1785 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 UTRNP46939 3433 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 NDUFB5O43674 189 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 EIF5P55010 431 aaKnown RBP6.32□□□□□ -1.4
VPS41-205ENST00000414632 DDR1Q08345 913 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 AAMPQ13685 434 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 COX20Q5RI15 118 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 DIEXFQ68CQ4 756 aaKnown RBP6.32□□□□□ -1.4
VPS41-205ENST00000414632 LIAT1Q6ZQX7 453 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 STAG2Q8N3U4 1231 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 XAGE2Q96GT9 111 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 TEX13AQ9BXU3 409 aaPredicted RBP6.32□□□□□ -1.4
VPS41-205ENST00000414632 RAB6BQ9NRW1 208 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 MBIPQ9NS73 344 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 STIM2Q9P246 746 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 NARFQ9UHQ1 456 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 CHD4Q14839 1912 aa6.32□□□□□ -1.4
VPS41-205ENST00000414632 TNRC6CQ9HCJ0 1690 aaKnown RBP6.31□□□□□ -1.4
VPS41-205ENST00000414632 ELL2O00472 640 aaPredicted RBP6.31□□□□□ -1.4
VPS41-205ENST00000414632 CHL1O00533 1208 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 CDK2AP1O14519 115 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 TNFRSF10BO14763 440 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 P4HBP07237 508 aaKnown RBP6.31□□□□□ -1.4
VPS41-205ENST00000414632 NR3C2P08235 984 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 IL6STP40189 918 aaPredicted RBP6.31□□□□□ -1.4
VPS41-205ENST00000414632 EIF1AXP47813 144 aaKnown RBP6.31□□□□□ -1.4
VPS41-205ENST00000414632 MTFR1Q15390 333 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 PROSER3Q2NL68 480 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 NLGN1Q8N2Q7 840 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 TSR2Q969E8 191 aaKnown RBP6.31□□□□□ -1.4
VPS41-205ENST00000414632 ARHGEF10LQ9HCE6 1279 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 PGPEP1Q9NXJ5 209 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 CARMIL3Q8ND23 1372 aa6.31□□□□□ -1.4
VPS41-205ENST00000414632 A0A087WZG4 1122 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 FAM177BA6PVY3 158 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 CAMTA2O94983 1202 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 IL2RAP01589 272 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 PSMA6P60900 246 aaKnown RBP6.3□□□□□ -1.4
VPS41-205ENST00000414632 NFIXQ14938 502 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 TBC1D9BQ66K14 1250 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 ALKBH2Q6NS38 261 aa6.3□□□□□ -1.4
VPS41-205ENST00000414632 TTLL7Q6ZT98 887 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms