RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
TRIM27-203ENST00000414543 UPF1Q92900 1129 aaKnown RBP eCLIP12.15□□□□□ -0.461e-8■■□□□ 12.6
TRIM27-203ENST00000414543 BRF1Q92994 677 aa12.15□□□□□ -0.46
TRIM27-203ENST00000414543 ANP32EQ9BTT0 268 aa12.15□□□□□ -0.46
TRIM27-203ENST00000414543 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
TRIM27-203ENST00000414543 C21orf2O43822 256 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 LARGE1O95461 756 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 DPEP1P16444 411 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 CHST3Q7LGC8 479 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 PODNQ7Z5L7 613 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 CERS3Q8IU89 383 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 TBC1D10CQ8IV04 446 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 RTFDC1Q9BY42 306 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-203ENST00000414543 NBPF3Q9H094 633 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 CNNM2Q9H8M5 875 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 KIAA1551Q9HCM1 1747 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 MINDY4BA8MYZ0 360 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 PRC1O43663 620 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 CTDSPL2Q05D32 466 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 RAB3GAP1Q15042 981 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 GRIK5Q16478 980 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 MFSD6Q6ZSS7 791 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 MB21D2Q8IYB1 491 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-203ENST00000414543 NECAB1Q8N987 351 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 AGXT2Q9BYV1 514 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 RNF41Q9H4P4 317 aaPredicted RBP12.14□□□□□ -0.47
TRIM27-203ENST00000414543 ATP8A2Q9NTI2 1148 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 SUGT1Q9Y2Z0 365 aa12.14□□□□□ -0.47
TRIM27-203ENST00000414543 MROH7-TTC4A0A0A0MT08 1334 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 TGFB2P61812 414 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 PPARAQ07869 468 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 STK3Q13188 491 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 DIXDC1Q155Q3 683 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 FBXL16Q8N461 479 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 KRT23Q9C075 422 aa12.13□□□□□ -0.47
TRIM27-203ENST00000414543 B4E1Z4 1266 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 PPP4CP60510 307 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 RTKN2Q8IZC4 609 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 STAG1Q8WVM7 1258 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 TOMM22Q9NS69 142 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 ANAPC4Q9UJX5 808 aa12.12□□□□□ -0.47
TRIM27-203ENST00000414543 ECE2O60344 883 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 PLCG2P16885 1265 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 KCNA3P22001 575 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 USP5P45974 858 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 APOBRQ0VD83 1088 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 TNPO1Q92973 898 aaKnown RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 CHMP4CQ96CF2 233 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 FAM163AQ96GL9 167 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 DCP1AQ9NPI6 582 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 KIF13BQ9NQT8 1826 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 PIM2Q9P1W9 311 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 MYH2Q9UKX2 1941 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 NAP1L2Q9ULW6 460 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 CHD4Q14839 1912 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 NEDD4P46934 1319 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 USP17L12C9JPN9 530 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 USP17L21D6R901 530 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 BTDP43251 543 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 ANTXR2P58335 489 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 KIAA2012Q0VF49 1180 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 AOC3Q16853 763 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 RRP12Q5JTH9 1297 aaKnown RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 CTR9Q6PD62 1173 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 SH3RF3Q8TEJ3 882 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 ZNF274Q96GC6 653 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 GBP4Q96PP9 640 aa12.11□□□□□ -0.47
TRIM27-203ENST00000414543 ARPP21Q9UBL0 812 aaPredicted RBP12.11□□□□□ -0.47
TRIM27-203ENST00000414543 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 GPR75-ASB3A0A0A6YYF3 556 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 F8W031 263 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-203ENST00000414543 KDM4AO75164 1064 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 SLC3A2P08195 630 aaKnown RBP12.1□□□□□ -0.47
TRIM27-203ENST00000414543 GJB2P29033 226 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 CYB5R4Q7L1T6 521 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 AMOTL1Q8IY63 956 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 STK11IPQ8N1F8 1099 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 GTF3C6Q969F1 213 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 TMEM87BQ96K49 555 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 INCENPQ9NQS7 918 aa12.1□□□□□ -0.47
TRIM27-203ENST00000414543 PPP1R1BQ9UD71 204 aaPredicted RBP12.1□□□□□ -0.47
TRIM27-203ENST00000414543 PPIP5K2O43314 1243 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 PFKFB2O60825 505 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
TRIM27-203ENST00000414543 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 SBK1Q52WX2 424 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 STRIP1Q5VSL9 837 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 CERS5Q8N5B7 392 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 PSMD1Q99460 953 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 MCM9Q9NXL9 1143 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 ZSWIM5Q9P217 1185 aa12.09□□□□□ -0.47
TRIM27-203ENST00000414543 ANGEL1Q9UNK9 670 aaKnown RBP12.09□□□□□ -0.47
TRIM27-203ENST00000414543 TTF2Q9UNY4 1162 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms