RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 BRF1Q92994 677 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 BICC1Q9H694 974 aaKnown RBP9.61□□□□□ -0.87
PBRM1-209ENST00000412587 PAG1Q9NWQ8 432 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 MRFAP1Q9Y605 127 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 SLC4A4Q9Y6R1 1079 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 PLEKHG1Q9ULL1 1385 aa9.61□□□□□ -0.87
PBRM1-209ENST00000412587 METAP2P50579 478 aaKnown RBP eCLIP9.6□□□□□ -0.87
PBRM1-209ENST00000412587 IFFO1Q0D2I5 559 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 ISM2Q6H9L7 571 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 ZNF804AQ7Z570 1209 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 CUL5Q93034 780 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-209ENST00000412587 RAB34Q9BZG1 259 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 SH3TC1Q8TE82 1336 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 TMEM94Q12767 1356 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 F8W031 263 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-209ENST00000412587 A1BGP04217 495 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 SEPT6Q14141 434 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 PARP10Q53GL7 1025 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 WDR78Q5VTH9 848 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 TAX1BP1Q86VP1 789 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 OGFOD1Q8N543 542 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 TTC37Q6PGP7 1564 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 GCC2Q8IWJ2 1684 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 CTAGE9A4FU28 777 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 RHOXF2BP0C7M4 288 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 TFCP2Q12800 502 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 ZNF496Q96IT1 587 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-209ENST00000412587 RHOXF2Q9BQY4 288 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 DACT1Q9NYF0 836 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 CHD1O14646 1710 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 SMIM24O75264 130 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 CHRM1P11229 460 aaPredicted RBP9.6□□□□□ -0.87
PBRM1-209ENST00000412587 GJB2P29033 226 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 LRMPQ12912 555 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 GRIPAP1Q4V328 841 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 RAB11FIP4Q86YS3 637 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 DNAJC10Q8IXB1 793 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 FBF1Q8TES7 1133 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 ESR2Q92731 530 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 KRT23Q9C075 422 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 VAT1LQ9HCJ6 419 aa9.6□□□□□ -0.87
PBRM1-209ENST00000412587 ZBTB7BO15156 539 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-209ENST00000412587 F13A1P00488 732 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 PCK1P35558 622 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 CCT5P48643 541 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 LACTBP83111 547 aaPredicted RBP9.59□□□□□ -0.87
PBRM1-209ENST00000412587 WTAPQ15007 396 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 BCAS4Q8TDM0 211 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 IMPACTQ9P2X3 320 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 PUF60Q9UHX1 559 aaKnown RBP9.59□□□□□ -0.87
PBRM1-209ENST00000412587 HDAC9Q9UKV0 1011 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 KLF18A0A0U1RQI7 1052 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 MMP14P50281 582 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 CARD10Q9BWT7 1032 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 ANKRD2Q9GZV1 360 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 PPFIA3O75145 1194 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 TCEANC2Q96MN5 208 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 LUC7LQ9NQ29 371 aaKnown RBP9.59□□□□□ -0.87
PBRM1-209ENST00000412587 POLD1P28340 1107 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 MXRA7P84157 204 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 TMEM266Q2M3C6 531 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 CEP128Q6ZU80 1094 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 ZNF365Q70YC5 407 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 CNNM2Q9H8M5 875 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 TFIP11Q9UBB9 837 aaKnown RBP9.59□□□□□ -0.87
PBRM1-209ENST00000412587 USP21Q9UK80 565 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 RIPOR2Q9Y4F9 1068 aa9.59□□□□□ -0.87
PBRM1-209ENST00000412587 PLXNC1O60486 1568 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 KDM5DQ9BY66 1539 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 LRRD1A4D1F6 860 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 NMIQ13287 307 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 SPECC1Q5M775 1068 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 SPATA24Q86W54 205 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 TMTC2Q8N394 836 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 CNBD1Q8NA66 436 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 SLC26A6Q9BXS9 759 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 BAIAP2L1Q9UHR4 511 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 LUC7L2Q9Y383 392 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 USP19O94966 1318 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 PAFAH1B1P43034 410 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 EGFL6Q8IUX8 553 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 EYA2O00167 538 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 ZBTB43O43298 467 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 GCFC2P16383 781 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 PPFIA1Q13136 1202 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 MAATS1Q7Z4T9 603 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 LRRC2Q9BYS8 371 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 NSRP1Q9H0G5 558 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 ZCCHC11Q5TAX3 1644 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 NPHP4O75161 1426 aaPredicted RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 RNF113AO15541 343 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 RPSAP08865 295 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 TSPY3P0CV98 308 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 TSPY8P0CW00 308 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 RANBP1P43487 201 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 ETF1P62495 437 aaKnown RBP9.58□□□□□ -0.88
PBRM1-209ENST00000412587 CCDC6Q16204 474 aa9.58□□□□□ -0.88
PBRM1-209ENST00000412587 RABGGTAQ92696 567 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms