RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
SNRNP35-202ENST00000412157 RTFDC1Q9BY42 306 aaPredicted RBP13.79□□□□□ -0.2
SNRNP35-202ENST00000412157 SCN9AQ15858 1988 aa13.79□□□□□ -0.2
SNRNP35-202ENST00000412157 SNED1Q8TER0 1413 aa13.79□□□□□ -0.2
SNRNP35-202ENST00000412157 MYH1P12882 1939 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 E7EWF7 191 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 C21orf2O43822 256 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 CPA1P15085 419 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 HAND2P61296 217 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 DOK7Q18PE1 504 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 RALYLQ86SE5 291 aaKnown RBP13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 ADGRA1Q86SQ6 560 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 CERS3Q8IU89 383 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 RTKN2Q8IZC4 609 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 RIOK1Q9BRS2 568 aaKnown RBP13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 CRNKL1Q9BZJ0 848 aaKnown RBP13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 SUGT1Q9Y2Z0 365 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 TAF6LQ9Y6J9 622 aa13.78□□□□□ -0.2
SNRNP35-202ENST00000412157 MROH7-TTC4A0A0A0MT08 1334 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 GSG1L2A8MUP6 293 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 BAG3O95817 575 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 DYNLL1P63167 89 aaKnown RBP13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 FGD1P98174 961 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 TRDNQ13061 729 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 STOX1Q6ZVD7 989 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 PODNQ7Z5L7 613 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 NCOA7Q8NI08 942 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 ZSCAN31Q96LW9 406 aaPredicted RBP13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 ALDH8A1Q9H2A2 487 aaPredicted RBP13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 AATFQ9NY61 560 aaKnown RBP eCLIP13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 PIM2Q9P1W9 311 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 LIMCH1Q9UPQ0 1083 aa13.77□□□□□ -0.21
SNRNP35-202ENST00000412157 PPIP5K2O43314 1243 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 PRKAB2O43741 272 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 ECE2O60344 883 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 KCNA3P22001 575 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 KIAA2012Q0VF49 1180 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 DHX32Q7L7V1 743 aaKnown RBP13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 ZNF384Q8TF68 577 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 DBNDD1Q9H9R9 158 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 SH2B1Q9NRF2 756 aaPredicted RBP13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 CHMP5Q9NZZ3 219 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 ADAMTSL1Q8N6G6 1762 aa13.76□□□□□ -0.21
SNRNP35-202ENST00000412157 MYH8P13535 1937 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 PLCG2P16885 1265 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 CUL4AQ13619 759 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 AOC3Q16853 763 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 GIMAP6Q6P9H5 292 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 SDR42E1Q8WUS8 393 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 PSMD1Q99460 953 aa13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 CIZ1Q9ULV3 898 aaPredicted RBP13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 DDX60LQ5H9U9 1706 aaKnown RBP13.75□□□□□ -0.21
SNRNP35-202ENST00000412157 KIF3CO14782 793 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 FKBP1AP62942 108 aaKnown RBP13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 DIXDC1Q155Q3 683 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 GRIK5Q16478 980 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 DALRD3Q5D0E6 543 aaKnown RBP13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 Q6ZUG5 572 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 INTS4Q96HW7 963 aaKnown RBP13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 TCEANC2Q96MN5 208 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 RNF41Q9H4P4 317 aaPredicted RBP13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 CWC22Q9HCG8 908 aaKnown RBP13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 ATP8A2Q9NTI2 1148 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 BCS1LQ9Y276 419 aa13.74□□□□□ -0.21
SNRNP35-202ENST00000412157 WDR19Q8NEZ3 1342 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 MCM5P33992 734 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 BTDP43251 543 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 USP5P45974 858 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 PPP4CP60510 307 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 TBC1D10CQ8IV04 446 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 AMOTL1Q8IY63 956 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 KRT23Q9C075 422 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 VPS33BQ9H267 617 aa13.73□□□□□ -0.21
SNRNP35-202ENST00000412157 GAKO14976 1311 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 USP17L3A6NCW0 530 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 USP17L4A6NCW7 530 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 MINDY4BA8MYZ0 360 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 APLP1P51693 650 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 EXOSC10Q01780 885 aaKnown RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 CTDSPL2Q05D32 466 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 PPARAQ07869 468 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 TOB2Q14106 344 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 AKNAD1Q5T1N1 836 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 STRIP1Q5VSL9 837 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 MFSD6Q6ZSS7 791 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 USP17L1Q7RTZ2 530 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 MB21D2Q8IYB1 491 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 LARGE2Q8N3Y3 721 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 STAG1Q8WVM7 1258 aa13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 FAM163AQ96GL9 167 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 ARPP21Q9UBL0 812 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.72□□□□□ -0.21
SNRNP35-202ENST00000412157 GPR75-ASB3A0A0A6YYF3 556 aa13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 F8W031 263 aaPredicted RBP13.71□□□□□ -0.21
SNRNP35-202ENST00000412157 PRC1O43663 620 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms