RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 ZNF445P59923 1031 aa22.74■■□□□ 1.23
LMO2-203ENST00000411482 SCRN1Q12765 414 aa22.74■■□□□ 1.23
LMO2-203ENST00000411482 CAVIN4Q5BKX8 364 aa22.74■■□□□ 1.23
LMO2-203ENST00000411482 AIDAQ96BJ3 306 aa22.74■■□□□ 1.23
LMO2-203ENST00000411482 TMED8Q6PL24 325 aaPredicted RBP22.73■■□□□ 1.23
LMO2-203ENST00000411482 LRRC2Q9BYS8 371 aa22.73■■□□□ 1.23
LMO2-203ENST00000411482 DENND2AQ9ULE3 1009 aa22.73■■□□□ 1.23
LMO2-203ENST00000411482 IRS2Q9Y4H2 1338 aa22.73■■□□□ 1.23
LMO2-203ENST00000411482 IGSF3O75054 1194 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 PDIA3P30101 505 aaKnown RBP22.72■■□□□ 1.23
LMO2-203ENST00000411482 RASSF7Q02833 373 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 CCDC93Q567U6 631 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 SOGA3Q5TF21 947 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 CC2D2BQ6DHV5 1058 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 GYG1P46976 350 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 MRE11P49959 708 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 ANTXR2P58335 489 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 HAND2P61296 217 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 FGD1P98174 961 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 APOBRQ0VD83 1088 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 STK3Q13188 491 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 USP48Q86UV5 1035 aa22.72■■□□□ 1.23
LMO2-203ENST00000411482 LTBP3Q9NS15 1303 aa22.71■■□□□ 1.23
LMO2-203ENST00000411482 TCHHQ07283 1943 aa22.71■■□□□ 1.23
LMO2-203ENST00000411482 WTIPA6NIX2 430 aaPredicted RBP22.71■■□□□ 1.23
LMO2-203ENST00000411482 GSG1L2A8MUP6 293 aa22.71■■□□□ 1.23
LMO2-203ENST00000411482 TMC4Q7Z404 712 aa22.71■■□□□ 1.23
LMO2-203ENST00000411482 RTKN2Q8IZC4 609 aa22.71■■□□□ 1.23
LMO2-203ENST00000411482 IFNL3Q8IZI9 196 aa22.71■■□□□ 1.23
LMO2-203ENST00000411482 NSUN7Q8NE18 718 aaKnown RBP22.71■■□□□ 1.23
LMO2-203ENST00000411482 COL1A1P02452 1464 aaPredicted RBP22.71■■□□□ 1.23
LMO2-203ENST00000411482 SALL1Q9NSC2 1324 aa22.7■■□□□ 1.22
LMO2-203ENST00000411482 PRC1O43663 620 aa22.7■■□□□ 1.22
LMO2-203ENST00000411482 MBD4O95243 580 aa22.7■■□□□ 1.22
LMO2-203ENST00000411482 CTDNEP1O95476 244 aa22.7■■□□□ 1.22
LMO2-203ENST00000411482 HMGN5P82970 282 aaKnown RBP22.7■■□□□ 1.22
LMO2-203ENST00000411482 EPB41L4AQ9HCS5 686 aaPredicted RBP22.7■■□□□ 1.22
LMO2-203ENST00000411482 DICER1Q9UPY3 1922 aaKnown RBP22.69■■□□□ 1.22
LMO2-203ENST00000411482 LTBP1Q14766 1721 aa22.69■■□□□ 1.22
LMO2-203ENST00000411482 XRCC6P12956 609 aaKnown RBP eCLIP22.69■■□□□ 1.22
LMO2-203ENST00000411482 GAS2L3Q86XJ1 694 aa22.69■■□□□ 1.22
LMO2-203ENST00000411482 TBC1D10CQ8IV04 446 aa22.69■■□□□ 1.22
LMO2-203ENST00000411482 LRP2BPQ9P2M1 347 aa22.69■■□□□ 1.22
LMO2-203ENST00000411482 JAK2O60674 1132 aa22.68■■□□□ 1.22
LMO2-203ENST00000411482 CAVIN1Q6NZI2 390 aaKnown RBP22.68■■□□□ 1.22
LMO2-203ENST00000411482 C15orf52Q6ZUT6 534 aaKnown RBP22.68■■□□□ 1.22
LMO2-203ENST00000411482 RALYLQ86SE5 291 aaKnown RBP22.68■■□□□ 1.22
LMO2-203ENST00000411482 CSPP1Q1MSJ5 1256 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 ZSCAN23Q3MJ62 389 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 CDC37L1Q7L3B6 337 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 RGS22Q8NE09 1264 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 PSMD1Q99460 953 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 TAOK3Q9H2K8 898 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 ARMT1Q9H993 441 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 NSFL1CQ9UNZ2 370 aaKnown RBP22.67■■□□□ 1.22
LMO2-203ENST00000411482 CNPY2Q9Y2B0 182 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 TIAM2Q8IVF5 1701 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 DUOX1Q9NRD9 1551 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 VPS37CA5D8V6 355 aaPredicted RBP22.67■■□□□ 1.22
LMO2-203ENST00000411482 APPP05067 770 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 HIBADHP31937 336 aaKnown RBP22.67■■□□□ 1.22
LMO2-203ENST00000411482 TRDNQ13061 729 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 GRIPAP1Q4V328 841 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 RTFDC1Q9BY42 306 aaPredicted RBP22.67■■□□□ 1.22
LMO2-203ENST00000411482 LEMD3Q9Y2U8 911 aa22.67■■□□□ 1.22
LMO2-203ENST00000411482 GPSM2P81274 684 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 NAA16Q6N069 864 aaPredicted RBP22.66■■□□□ 1.22
LMO2-203ENST00000411482 CHST3Q7LGC8 479 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 LCORLQ8N3X6 602 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 MTA3Q9BTC8 594 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 NACAP1Q9BZK3 213 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 GRPEL1Q9HAV7 217 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 TMEM63CQ9P1W3 806 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 KIF3AQ9Y496 699 aa22.66■■□□□ 1.22
LMO2-203ENST00000411482 LMNB1P20700 586 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 CYP7A1P22680 504 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 UBE2HP62256 183 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 C9orf131Q5VYM1 1079 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 VPS37DQ86XT2 251 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 MPNDQ8N594 471 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 TMEM87BQ96K49 555 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 RIOK1Q9BRS2 568 aaKnown RBP22.65■■□□□ 1.22
LMO2-203ENST00000411482 NAPBQ9H115 298 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 BRPF3Q9ULD4 1205 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 HPS5Q9UPZ3 1129 aa22.65■■□□□ 1.22
LMO2-203ENST00000411482 DTNBO60941 627 aa22.64■■□□□ 1.21
LMO2-203ENST00000411482 GADD45BO75293 160 aaPredicted RBP22.64■■□□□ 1.21
LMO2-203ENST00000411482 NCLP19338 710 aaKnown RBP22.64■■□□□ 1.21
LMO2-203ENST00000411482 DNM1Q05193 864 aaKnown RBP22.64■■□□□ 1.21
LMO2-203ENST00000411482 GPHNQ9NQX3 736 aaPredicted RBP22.64■■□□□ 1.21
LMO2-203ENST00000411482 ZNF277Q9NRM2 450 aaPredicted RBP22.64■■□□□ 1.21
LMO2-203ENST00000411482 PODXL2Q9NZ53 605 aa22.64■■□□□ 1.21
LMO2-203ENST00000411482 ELP1O95163 1332 aa22.64■■□□□ 1.21
LMO2-203ENST00000411482 PTPDC1A2A3K4 754 aa22.63■■□□□ 1.21
LMO2-203ENST00000411482 DHX16O60231 1041 aaKnown RBP22.63■■□□□ 1.21
LMO2-203ENST00000411482 KLRK1P26718 216 aa22.63■■□□□ 1.21
LMO2-203ENST00000411482 ADGRA1Q86SQ6 560 aa22.63■■□□□ 1.21
LMO2-203ENST00000411482 ZNF384Q8TF68 577 aa22.63■■□□□ 1.21
LMO2-203ENST00000411482 STAG1Q8WVM7 1258 aa22.63■■□□□ 1.21
LMO2-203ENST00000411482 ZSCAN16Q9H4T2 348 aaPredicted RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms