RNA–Protein interactions for RNA: ENST00000411220.1

RNU4-88P-201, Transcript of RNA, U4 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU4-88P, Length 86 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-88P-201ENST00000411220 U3KQE9 123 aa0.41□□□□□ -2.34
RNU4-88P-201ENST00000411220 GAS8-AS1O95177 125 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 NFKB1P19838 968 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 HILS1P60008 231 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 MLLT1Q03111 559 aaPredicted RBP0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 KANK4Q5T7N3 995 aaPredicted RBP0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 NUTM2GQ5VZR2 741 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 GLB1LQ6UWU2 654 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 TMEFF1Q8IYR6 380 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 SSBP3Q9BWW4 388 aaPredicted RBP0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 RNF32Q9H0A6 362 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 TNKS2Q9H2K2 1166 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 MBD1Q9UIS9 605 aaPredicted RBP0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 NOTCH4Q99466 2003 aa0.4□□□□□ -2.35
RNU4-88P-201ENST00000411220 A0A1W2PNU3 283 aaPredicted RBP0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 KMT2DO14686 5537 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 FSCN2O14926 492 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 MUSKO15146 869 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 NFICP08651 508 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 MT3P25713 68 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 OXCT1P55809 520 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 GPLD1P80108 840 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 SPRED3Q2MJR0 410 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 TXNDC11Q6PKC3 985 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 SMG8Q8ND04 991 aaKnown RBP0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 ZNF503Q96F45 646 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 SPATA25Q9BR10 227 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 CARS2Q9HA77 564 aaKnown RBP0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 SUGCTQ9HAC7 445 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 CYP4F12Q9HCS2 524 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 FBLN5Q9UBX5 448 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 TESMINQ9Y4I5 508 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 LRP12Q9Y561 859 aa0.39□□□□□ -2.35
RNU4-88P-201ENST00000411220 NDUFV2P19404 249 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 CAP1Q01518 475 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 TROAPQ12815 778 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 ICAM4Q14773 271 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 R3HDM1Q15032 1099 aaKnown RBP0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 NBPF9Q3BBW0 867 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 ZNF585AQ6P3V2 769 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 CSRNP2Q9H175 543 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 SEMA4AQ9H3S1 761 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 DEF6Q9H4E7 631 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 C1GALT1Q9NS00 363 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 GPSM3Q9Y4H4 160 aa0.38□□□□□ -2.35
RNU4-88P-201ENST00000411220 SETD1BQ9UPS6 1966 aaKnown RBP0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 NOBOXO60393 691 aa0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 MAP3K6O95382 1288 aa0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 GJA9P57773 515 aa0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 C2CD4AQ8NCU7 369 aaPredicted RBP0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 CD248Q9HCU0 757 aa0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 GPC6Q9Y625 555 aaPredicted RBP0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 MDN1Q9NU22 5596 aa0.37□□□□□ -2.35
RNU4-88P-201ENST00000411220 A0A1B0GVY2 172 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 ADH4P08319 380 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 DRD2P14416 443 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 ITIH2P19823 946 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 PDE6BP35913 854 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 SELENOPP49908 381 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 LSM12Q3MHD2 195 aaKnown RBP0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 ZNF628Q5EBL2 1059 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 DGKKQ5KSL6 1271 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 HFE2Q6ZVN8 426 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 DHX32Q7L7V1 743 aaKnown RBP0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 ZSCAN29Q8IWY8 852 aaPredicted RBP0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 KLHDC7BQ96G42 594 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 GSX2Q9BZM3 304 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 SIRT5Q9NXA8 310 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 WWOXQ9NZC7 414 aa0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 ZC3H4Q9UPT8 1303 aaKnown RBP0.36□□□□□ -2.35
RNU4-88P-201ENST00000411220 FBN3Q75N90 2809 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 RAB6AP20340 208 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 SRSF3P84103 164 aaKnown RBP0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 PTH1RQ03431 593 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 TYRO3Q06418 890 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 PDE3BQ13370 1112 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 SEZ6L2Q6UXD5 910 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 LIPIQ6XZB0 460 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 LIMS2Q7Z4I7 341 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 TTC6Q86TZ1 520 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 FOXP4Q8IVH2 680 aaPredicted RBP0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 C1orf127Q8N9H9 656 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 CSRNP3Q8WYN3 585 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 INTS4Q96HW7 963 aaKnown RBP0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 ALPK1Q96QP1 1244 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 TMPRSS13Q9BYE2 586 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 SEC31BQ9NQW1 1179 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 FKBPLQ9UIM3 349 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 TRIM33Q9UPN9 1127 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 TCAF1Q9Y4C2 921 aa0.35□□□□□ -2.35
RNU4-88P-201ENST00000411220 MOXD2PA6NHM9 499 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 RBAK-RBAKDNI3L0D1 243 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 HPXP02790 462 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 FAM87AP0C7U9 286 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 ERVFC1P60507 584 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 CCINQ13939 588 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 E2F4Q16254 413 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 RNF207Q6ZRF8 634 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 Q6ZTC4 211 aa0.34□□□□□ -2.36
RNU4-88P-201ENST00000411220 TREML1Q86YW5 311 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms