RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 FAM160A1Q05DH4 1040 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 SEL1L2Q5TEA6 688 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 CNBD1Q8NA66 436 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 ABCA10Q8WWZ4 1543 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 MYO10Q9HD67 2058 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 IRX3P78415 501 aaPredicted RBP12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 LEO1Q8WVC0 666 aaPredicted RBP12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 MCM6Q14566 821 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 FAM193BQ96PV7 902 aaPredicted RBP12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 PAGR1Q9BTK6 254 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 ITKQ08881 620 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 NR1I2O75469 434 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 AZI2Q9H6S1 392 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 CTTNBP2Q8WZ74 1663 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 ALDH3A1P30838 453 aa12.59□□□□□ -0.39
PRPF40A-202ENST00000410080 DHX29Q7Z478 1369 aaKnown RBP12.58□□□□□ -0.39
PRPF40A-202ENST00000410080 ARHGAP27Q6ZUM4 889 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 DDX19AQ9NUU7 478 aaKnown RBP12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 PAG1Q9NWQ8 432 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 HMG20BQ9P0W2 317 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 BICDL2A1A5D9 508 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 MCMDC2Q4G0Z9 681 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 HACE1Q8IYU2 909 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 GNA11P29992 359 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 TTC22Q5TAA0 569 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 GIMAP6Q6P9H5 292 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 USTQ9Y2C2 406 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 CALML3P27482 149 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 ANO6Q4KMQ2 910 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 TEX11Q8IYF3 940 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 PARD3BQ8TEW8 1205 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 MEIS3Q99687 375 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 ZNF608Q9ULD9 1512 aaPredicted RBP12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 TLDC2A0PJX2 215 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 TACC1O75410 805 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 CHMP6Q96FZ7 201 aa12.58□□□□□ -0.4
PRPF40A-202ENST00000410080 TNPO1Q92973 898 aaKnown RBP12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 MAN1A1P33908 653 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 DNM2P50570 870 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 GABPB2Q8TAK5 448 aaPredicted RBP12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 ZNF165P49910 485 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 ERCC6LQ2NKX8 1250 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 LETM2Q2VYF4 491 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 AFAP1L2Q8N4X5 818 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 ZSCAN16Q9H4T2 348 aaPredicted RBP12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 ZEB2O60315 1214 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 STX17P56962 302 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 TMTC4Q5T4D3 741 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 IGHDP01880 384 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 PPARDQ03181 441 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 LMBR1LQ6UX01 489 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 UNC13AQ9UPW8 1703 aa12.57□□□□□ -0.4
PRPF40A-202ENST00000410080 H7C1D1 291 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 WDR46O15213 610 aaKnown RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 GNL1P36915 607 aaPredicted RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 RNASE9P60153 205 aaKnown RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 NIM1KQ8IY84 436 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 SYCP2Q9BX26 1530 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 SPOPO43791 374 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 MNAT1P51948 309 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 BSPRYQ5W0U4 402 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 FMNL3Q8IVF7 1028 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 TTC14Q96N46 770 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 FAM184BQ9ULE4 1060 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 CTNND2Q9UQB3 1225 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 CSADQ9Y600 493 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 IL2RBP14784 551 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 CEP85LQ5SZL2 805 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 DPY19L2Q6NUT2 758 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 PPP1R12AO14974 1030 aaPredicted RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 SH2D4BQ5SQS7 431 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 C14orf93Q9H972 538 aaKnown RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 GUCA1BQ9UMX6 200 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 FEZ2Q9UHY8 353 aaPredicted RBP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 GRM8O00222 908 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 SEPT10Q9P0V9 454 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 MTUS1Q9ULD2 1270 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
PRPF40A-202ENST00000410080 ESYT2A0FGR8 921 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 PALM3A6NDB9 673 aaPredicted RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 GNAT2P19087 354 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 SEPT6Q14141 434 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 CLUL1Q15846 466 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 SESTD1Q86VW0 696 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 NAP1L4Q99733 375 aaKnown RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 TBC1D7Q9P0N9 293 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 ABCC1P33527 1531 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 NPHP3Q7Z494 1330 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 SRGAP1Q7Z6B7 1085 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 BRF1Q92994 677 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 BTG4Q9NY30 223 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 CCNL1Q9UK58 526 aaPredicted RBP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 CCDC24Q8N4L8 307 aa12.55□□□□□ -0.4
PRPF40A-202ENST00000410080 VWA3AA6NCI4 1184 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms