RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PLCG2P16885 1265 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 EPHX2P34913 555 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 BTDP43251 543 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 RBM5P52756 815 aaKnown RBP eCLIP18.32■□□□□ 0.52
LSM5-207ENST00000410044 HIRAP54198 1017 aaPredicted RBP18.32■□□□□ 0.52
LSM5-207ENST00000410044 RHBDL3P58872 404 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 RUFY2Q8WXA3 655 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 TAF1DQ9H5J8 278 aaPredicted RBP18.32■□□□□ 0.52
LSM5-207ENST00000410044 ADAMTSL1Q8N6G6 1762 aa18.32■□□□□ 0.52
LSM5-207ENST00000410044 RAD50Q92878 1312 aa18.31■□□□□ 0.52
LSM5-207ENST00000410044 A0A0D9SFI3 127 aa18.31■□□□□ 0.52
LSM5-207ENST00000410044 TBC1D10BQ4KMP7 808 aaPredicted RBP18.31■□□□□ 0.52
LSM5-207ENST00000410044 CDC42EP5Q6NZY7 148 aa18.31■□□□□ 0.52
LSM5-207ENST00000410044 CWC27Q6UX04 472 aaKnown RBP18.31■□□□□ 0.52
LSM5-207ENST00000410044 PNMA8AQ86V59 439 aaPredicted RBP18.31■□□□□ 0.52
LSM5-207ENST00000410044 STRBPQ96SI9 672 aaKnown RBP18.31■□□□□ 0.52
LSM5-207ENST00000410044 SEC62Q99442 399 aaKnown RBP18.31■□□□□ 0.52
LSM5-207ENST00000410044 NOL10Q9BSC4 688 aaKnown RBP18.31■□□□□ 0.52
LSM5-207ENST00000410044 RRAGCQ9HB90 399 aa18.31■□□□□ 0.52
LSM5-207ENST00000410044 AATFQ9NY61 560 aaKnown RBP eCLIP18.31■□□□□ 0.52
LSM5-207ENST00000410044 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
LSM5-207ENST00000410044 M0R2C6 588 aa18.3■□□□□ 0.52
LSM5-207ENST00000410044 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
LSM5-207ENST00000410044 DYNLL1P63167 89 aaKnown RBP18.3■□□□□ 0.52
LSM5-207ENST00000410044 NBPF9Q3BBW0 867 aa18.3■□□□□ 0.52
LSM5-207ENST00000410044 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
LSM5-207ENST00000410044 FKBP1CQ5VVH2 108 aa18.3■□□□□ 0.52
LSM5-207ENST00000410044 MIGA1Q8NAN2 632 aa18.3■□□□□ 0.52
LSM5-207ENST00000410044 TRPM4Q8TD43 1214 aa18.3■□□□□ 0.52
LSM5-207ENST00000410044 ZC3H15Q8WU90 426 aaKnown RBP18.3■□□□□ 0.52
LSM5-207ENST00000410044 USP40Q9NVE5 1235 aa18.3■□□□□ 0.52
LSM5-207ENST00000410044 SGSM2O43147 1006 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 GPAA1O43292 621 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 SPDYE2Q495Y8 402 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 CASC1Q6TDU7 716 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 AIDAQ96BJ3 306 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 IDI2Q9BXS1 227 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 TDRD3Q9H7E2 651 aaKnown RBP18.29■□□□□ 0.52
LSM5-207ENST00000410044 ZNF70Q9UC06 446 aaPredicted RBP18.29■□□□□ 0.52
LSM5-207ENST00000410044 RPAP1Q9BWH6 1393 aaPredicted RBP18.29■□□□□ 0.52
LSM5-207ENST00000410044 CDK5RAP2Q96SN8 1893 aa18.29■□□□□ 0.52
LSM5-207ENST00000410044 MYO1BO43795 1136 aa18.28■□□□□ 0.52
LSM5-207ENST00000410044 MBD4O95243 580 aa18.28■□□□□ 0.52
LSM5-207ENST00000410044 GNAT2P19087 354 aa18.28■□□□□ 0.52
LSM5-207ENST00000410044 MFAP1P55081 439 aaKnown RBP18.28■□□□□ 0.52
LSM5-207ENST00000410044 LCORLQ8N3X6 602 aa18.28■□□□□ 0.52
LSM5-207ENST00000410044 SH3RF3Q8TEJ3 882 aaPredicted RBP18.28■□□□□ 0.52
LSM5-207ENST00000410044 ESYT1Q9BSJ8 1104 aa18.28■□□□□ 0.52
LSM5-207ENST00000410044 ARMT1Q9H993 441 aa18.28■□□□□ 0.52
LSM5-207ENST00000410044 PATL2C9JE40 543 aaKnown RBP18.27■□□□□ 0.52
LSM5-207ENST00000410044 WDHD1O75717 1129 aaPredicted RBP18.27■□□□□ 0.52
LSM5-207ENST00000410044 ZNF589Q86UQ0 364 aaPredicted RBP18.27■□□□□ 0.52
LSM5-207ENST00000410044 CRNKL1Q9BZJ0 848 aaKnown RBP18.27■□□□□ 0.52
LSM5-207ENST00000410044 IL25Q9H293 177 aa18.27■□□□□ 0.52
LSM5-207ENST00000410044 MKRN1Q9UHC7 482 aaKnown RBP18.27■□□□□ 0.52
LSM5-207ENST00000410044 POLR2AP24928 1970 aaKnown RBP18.27■□□□□ 0.52
LSM5-207ENST00000410044 FOCADQ5VW36 1801 aa18.27■□□□□ 0.52
LSM5-207ENST00000410044 CCDC171Q6TFL3 1326 aa18.26■□□□□ 0.51
LSM5-207ENST00000410044 PITPNM2Q9BZ72 1349 aa18.26■□□□□ 0.51
LSM5-207ENST00000410044 GIMAP6Q6P9H5 292 aa18.26■□□□□ 0.51
LSM5-207ENST00000410044 NMRK2Q9NPI5 230 aa18.26■□□□□ 0.51
LSM5-207ENST00000410044 ATP8A2Q9NTI2 1148 aa18.26■□□□□ 0.51
LSM5-207ENST00000410044 GSG1L2A8MUP6 293 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 ENTPD3O75355 529 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 ALX1Q15699 326 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 CCDC129Q6ZRS4 1044 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 FAM83AQ86UY5 434 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 TEX11Q8IYF3 940 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 TMOD2Q9NZR1 351 aa18.25■□□□□ 0.51
LSM5-207ENST00000410044 FOXP2O15409 715 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 PRKAB2O43741 272 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 C8orf34Q49A92 452 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 TGFBRAP1Q8WUH2 860 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 DSCC1Q9BVC3 393 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 FAM198AQ9UFP1 575 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
LSM5-207ENST00000410044 ASTN2O75129 1339 aaPredicted RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 CLRN2A0PK11 232 aa18.23■□□□□ 0.51
LSM5-207ENST00000410044 EPB41L2O43491 1005 aaKnown RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 EIF5BO60841 1220 aaKnown RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 YY1P25490 414 aa18.23■□□□□ 0.51
LSM5-207ENST00000410044 NFIAQ12857 509 aa18.23■□□□□ 0.51
LSM5-207ENST00000410044 TNFAIP1Q13829 316 aa18.23■□□□□ 0.51
LSM5-207ENST00000410044 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 APOBEC3FQ8IUX4 373 aaKnown RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 GPBP1L1Q9HC44 474 aaPredicted RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 DCP1AQ9NPI6 582 aaPredicted RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 DDX4Q9NQI0 724 aaKnown RBP18.23■□□□□ 0.51
LSM5-207ENST00000410044 USP5P45974 858 aa18.22■□□□□ 0.51
LSM5-207ENST00000410044 VPS53Q5VIR6 699 aa18.22■□□□□ 0.51
LSM5-207ENST00000410044 LDHDQ86WU2 507 aa18.22■□□□□ 0.51
LSM5-207ENST00000410044 IFNL3Q8IZI9 196 aa18.22■□□□□ 0.51
LSM5-207ENST00000410044 ZNF526Q8TF50 670 aaPredicted RBP18.22■□□□□ 0.51
LSM5-207ENST00000410044 FAM151AQ8WW52 585 aa18.22■□□□□ 0.51
LSM5-207ENST00000410044 DCPSQ96C86 337 aaKnown RBP18.22■□□□□ 0.51
LSM5-207ENST00000410044 COL2A1P02458 1487 aaPredicted RBP18.21■□□□□ 0.51
LSM5-207ENST00000410044 CNTNAP1P78357 1384 aa18.21■□□□□ 0.51
LSM5-207ENST00000410044 TNNI2P48788 182 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms