RNA–Protein interactions for RNA: ENST00000409938.5

EPHA4-203, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene EPHA4, Length 3,363 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-203ENST00000409938 PHLPP2Q6ZVD8 1323 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 HAND2P61296 217 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 FANCCQ00597 558 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 FKBP4Q02790 459 aaKnown RBP eCLIP9.07□□□□□ -0.96
EPHA4-203ENST00000409938 TBX2Q13207 712 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-203ENST00000409938 TTC39AQ5SRH9 613 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 SGMS1Q86VZ5 419 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 IGDCC4Q8TDY8 1250 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ZBTB3Q9H5J0 574 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 TRMT1Q9NXH9 659 aaKnown RBP9.07□□□□□ -0.96
EPHA4-203ENST00000409938 DENND2AQ9ULE3 1009 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ANGEL1Q9UNK9 670 aaKnown RBP9.07□□□□□ -0.96
EPHA4-203ENST00000409938 STK36Q9NRP7 1315 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 DLEC1Q9Y238 1755 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 SLIT2O94813 1529 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ALX1Q15699 326 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ELF2Q15723 593 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 NT5DC1Q5TFE4 455 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 TMC6Q7Z403 805 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ZBTB38Q8NAP3 1195 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-203ENST00000409938 LRRN4CLQ8ND94 238 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 INTS13Q9NVM9 706 aa9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ZHX1Q9UKY1 873 aaPredicted RBP9.07□□□□□ -0.96
EPHA4-203ENST00000409938 ZNF213O14771 459 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 RANBP6O60518 1105 aaKnown RBP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 CDC27P30260 824 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 UBE3CQ15386 1083 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 SF3A1Q15459 793 aaKnown RBP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 METTL16Q86W50 562 aaKnown RBP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 FCHSD1Q86WN1 690 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 VPS37DQ86XT2 251 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 FOXP4Q8IVH2 680 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 REXO1L1PQ8IX06 675 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 ZCRB1Q8TBF4 217 aaKnown RBP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 CSB-PGBD3P0DP91 1061 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 ATP1A3P13637 1013 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 BMP6P22004 513 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 FAM193AP78312 1265 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 CCDC57Q2TAC2 916 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 APOA5Q6Q788 366 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 PI16Q6UXB8 463 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 VSTM4Q8IW00 320 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 ZNF592Q92610 1267 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 DPF2Q92785 391 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 A0A1B0GUL6 1792 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 LAMB2P55268 1798 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 SFPQP23246 707 aaKnown RBP eCLIP9.06□□□□□ -0.96
EPHA4-203ENST00000409938 AIFM3Q96NN9 605 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 LY9Q9HBG7 655 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 SENP2Q9HC62 589 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 TACC3Q9Y6A5 838 aa9.06□□□□□ -0.96
EPHA4-203ENST00000409938 BCL9LQ86UU0 1499 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 UBN2Q6ZU65 1347 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 TERF2Q15554 542 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 KRT40Q6A162 431 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 KRT222Q8N1A0 295 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 RREB1Q92766 1687 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 CUTAO60888 179 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 ZRANB2O95218 330 aaKnown RBP eCLIP9.05□□□□□ -0.96
EPHA4-203ENST00000409938 SYKP43405 635 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 SARSP49591 514 aaKnown RBP9.05□□□□□ -0.96
EPHA4-203ENST00000409938 ETF1P62495 437 aaKnown RBP9.05□□□□□ -0.96
EPHA4-203ENST00000409938 MYL5Q02045 173 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 WASHC4Q2M389 1173 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 SYNE3Q6ZMZ3 975 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 TMEM87BQ96K49 555 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 ALG1Q9BT22 464 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.05□□□□□ -0.96
EPHA4-203ENST00000409938 PIH1D3Q9NQM4 214 aaKnown RBP9.05□□□□□ -0.96
EPHA4-203ENST00000409938 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.05□□□□□ -0.96
EPHA4-203ENST00000409938 FHOD1Q9Y613 1164 aa9.05□□□□□ -0.96
EPHA4-203ENST00000409938 PHLPP1O60346 1717 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 BIN1O00499 593 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 CDKL5O76039 1030 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 SMC2O95347 1197 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 ZNF18P17022 549 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 LIFRP42702 1097 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 NAP1L2Q9ULW6 460 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 TPM4P67936 248 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 HSP90AB3PQ58FF7 597 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 SYT10Q6XYQ8 523 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 KRBA2Q6ZNG9 492 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 RALYLQ86SE5 291 aaKnown RBP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 STK11IPQ8N1F8 1099 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 TTLL11Q8NHH1 800 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 SPATA20Q8TB22 786 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 UBXN6Q9BZV1 441 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 CCP110O43303 1012 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 FGFR2P21802 821 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 METAP2P50579 478 aaKnown RBP eCLIP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 PDE4BQ07343 736 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 TTF1Q15361 905 aaPredicted RBP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 STRBPQ96SI9 672 aaKnown RBP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 CARD10Q9BWT7 1032 aa9.04□□□□□ -0.96
EPHA4-203ENST00000409938 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.04□□□□□ -0.96
EPHA4-203ENST00000409938 CICQ96RK0 1608 aaPredicted RBP9.03□□□□□ -0.96
EPHA4-203ENST00000409938 WNK3Q9BYP7 1800 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms