RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 BTDP43251 543 aa20.06■□□□□ 0.8
SUMO1-208ENST00000409627 CERS3Q8IU89 383 aa20.06■□□□□ 0.8
SUMO1-208ENST00000409627 APPBP2Q92624 585 aa20.06■□□□□ 0.8
SUMO1-208ENST00000409627 NOL10Q9BSC4 688 aaKnown RBP20.06■□□□□ 0.8
SUMO1-208ENST00000409627 MYO1BO43795 1136 aa20.05■□□□□ 0.8
SUMO1-208ENST00000409627 BAG3O95817 575 aa20.05■□□□□ 0.8
SUMO1-208ENST00000409627 PPP4CP60510 307 aa20.05■□□□□ 0.8
SUMO1-208ENST00000409627 NBPF9Q3BBW0 867 aa20.05■□□□□ 0.8
SUMO1-208ENST00000409627 ZMYM1Q5SVZ6 1142 aa20.05■□□□□ 0.8
SUMO1-208ENST00000409627 SPDYE2Q495Y8 402 aa20.04■□□□□ 0.8
SUMO1-208ENST00000409627 SLFNL1Q499Z3 407 aa20.04■□□□□ 0.8
SUMO1-208ENST00000409627 ZC3H15Q8WU90 426 aaKnown RBP20.04■□□□□ 0.8
SUMO1-208ENST00000409627 AATFQ9NY61 560 aaKnown RBP eCLIP20.04■□□□□ 0.8
SUMO1-208ENST00000409627 PLCG2P16885 1265 aa20.03■□□□□ 0.8
SUMO1-208ENST00000409627 EAPPQ56P03 285 aaPredicted RBP20.03■□□□□ 0.8
SUMO1-208ENST00000409627 MIGA1Q8NAN2 632 aa20.03■□□□□ 0.8
SUMO1-208ENST00000409627 ZNF784Q8NCA9 323 aaPredicted RBP20.03■□□□□ 0.8
SUMO1-208ENST00000409627 RIOK1Q9BRS2 568 aaKnown RBP20.03■□□□□ 0.8
SUMO1-208ENST00000409627 TDRD3Q9H7E2 651 aaKnown RBP20.03■□□□□ 0.8
SUMO1-208ENST00000409627 DIAPH3Q9NSV4 1193 aa20.03■□□□□ 0.8
SUMO1-208ENST00000409627 PITPNM2Q9BZ72 1349 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 MAGEB6P1A0A0J9YX57 407 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 RHBDL3P58872 404 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 CDC42EP5Q6NZY7 148 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 OSBP2Q969R2 916 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 PUS7LQ9H0K6 701 aaKnown RBP20.02■□□□□ 0.8
SUMO1-208ENST00000409627 HELLSQ9NRZ9 838 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 USP40Q9NVE5 1235 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 ZNF70Q9UC06 446 aaPredicted RBP20.02■□□□□ 0.8
SUMO1-208ENST00000409627 PGAP2Q9UHJ9 254 aa20.02■□□□□ 0.8
SUMO1-208ENST00000409627 POLR2AP24928 1970 aaKnown RBP20.02■□□□□ 0.8
SUMO1-208ENST00000409627 KIF3CO14782 793 aa20.01■□□□□ 0.79
SUMO1-208ENST00000409627 DYNLL1P63167 89 aaKnown RBP20.01■□□□□ 0.79
SUMO1-208ENST00000409627 NMIQ13287 307 aaPredicted RBP20.01■□□□□ 0.79
SUMO1-208ENST00000409627 LDHDQ86WU2 507 aa20.01■□□□□ 0.79
SUMO1-208ENST00000409627 GGA3Q9NZ52 723 aa20.01■□□□□ 0.79
SUMO1-208ENST00000409627 TMOD2Q9NZR1 351 aa20.01■□□□□ 0.79
SUMO1-208ENST00000409627 ASTN2O75129 1339 aaPredicted RBP20.01■□□□□ 0.79
SUMO1-208ENST00000409627 A0A0D9SFI3 127 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 CLRN2A0PK11 232 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 M0R2C6 588 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 MBD4O95243 580 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 CHMLP26374 656 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 ANGEL2Q5VTE6 544 aaKnown RBP20■□□□□ 0.79
SUMO1-208ENST00000409627 FKBP1CQ5VVH2 108 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 LCORLQ8N3X6 602 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 SH3RF3Q8TEJ3 882 aaPredicted RBP20■□□□□ 0.79
SUMO1-208ENST00000409627 AIDAQ96BJ3 306 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 FAM227BQ96M60 508 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 NAV1Q8NEY1 1877 aa20■□□□□ 0.79
SUMO1-208ENST00000409627 POTEIP0CG38 1075 aa19.99■□□□□ 0.79
SUMO1-208ENST00000409627 POTEJP0CG39 1038 aa19.99■□□□□ 0.79
SUMO1-208ENST00000409627 MCMDC2Q4G0Z9 681 aa19.99■□□□□ 0.79
SUMO1-208ENST00000409627 APOBEC3FQ8IUX4 373 aaKnown RBP19.99■□□□□ 0.79
SUMO1-208ENST00000409627 TEX11Q8IYF3 940 aa19.99■□□□□ 0.79
SUMO1-208ENST00000409627 SEC62Q99442 399 aaKnown RBP19.99■□□□□ 0.79
SUMO1-208ENST00000409627 IDI2Q9BXS1 227 aa19.99■□□□□ 0.79
SUMO1-208ENST00000409627 RAD50Q92878 1312 aa19.99■□□□□ 0.79
SUMO1-208ENST00000409627 DDX60LQ5H9U9 1706 aaKnown RBP19.99■□□□□ 0.79
SUMO1-208ENST00000409627 GPAA1O43292 621 aa19.98■□□□□ 0.79
SUMO1-208ENST00000409627 CDC45O75419 566 aa19.98■□□□□ 0.79
SUMO1-208ENST00000409627 NPM3O75607 178 aaKnown RBP19.98■□□□□ 0.79
SUMO1-208ENST00000409627 WDHD1O75717 1129 aaPredicted RBP19.98■□□□□ 0.79
SUMO1-208ENST00000409627 TNFAIP1Q13829 316 aa19.98■□□□□ 0.79
SUMO1-208ENST00000409627 CWC27Q6UX04 472 aaKnown RBP19.98■□□□□ 0.79
SUMO1-208ENST00000409627 DCPSQ96C86 337 aaKnown RBP19.98■□□□□ 0.79
SUMO1-208ENST00000409627 ARMT1Q9H993 441 aa19.98■□□□□ 0.79
SUMO1-208ENST00000409627 VEZTQ9HBM0 779 aa19.98■□□□□ 0.79
SUMO1-208ENST00000409627 CLEC11AQ9Y240 323 aa19.98■□□□□ 0.79
SUMO1-208ENST00000409627 CACNB3P54284 484 aa19.97■□□□□ 0.79
SUMO1-208ENST00000409627 RUFY2Q8WXA3 655 aa19.97■□□□□ 0.79
SUMO1-208ENST00000409627 STRBPQ96SI9 672 aaKnown RBP19.97■□□□□ 0.79
SUMO1-208ENST00000409627 CRNKL1Q9BZJ0 848 aaKnown RBP19.97■□□□□ 0.79
SUMO1-208ENST00000409627 MYH1P12882 1939 aa19.97■□□□□ 0.79
SUMO1-208ENST00000409627 GNAT2P19087 354 aa19.96■□□□□ 0.79
SUMO1-208ENST00000409627 TNNI2P48788 182 aa19.96■□□□□ 0.79
SUMO1-208ENST00000409627 NFIAQ12857 509 aa19.96■□□□□ 0.79
SUMO1-208ENST00000409627 FAM83AQ86UY5 434 aa19.96■□□□□ 0.79
SUMO1-208ENST00000409627 COL2A1P02458 1487 aaPredicted RBP19.96■□□□□ 0.79
SUMO1-208ENST00000409627 CCDC171Q6TFL3 1326 aa19.96■□□□□ 0.79
SUMO1-208ENST00000409627 CNTNAP1P78357 1384 aa19.95■□□□□ 0.79
SUMO1-208ENST00000409627 TCP10L2B9ZVM9 353 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 ENTPD3O75355 529 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 MFAP1P55081 439 aaKnown RBP19.95■□□□□ 0.78
SUMO1-208ENST00000409627 CHADLQ6NUI6 762 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 CASC1Q6TDU7 716 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 SULF1Q8IWU6 871 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 DDX4Q9NQI0 724 aaKnown RBP19.95■□□□□ 0.78
SUMO1-208ENST00000409627 FAM198AQ9UFP1 575 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 PPP2R3BQ9Y5P8 575 aa19.95■□□□□ 0.78
SUMO1-208ENST00000409627 RPAP1Q9BWH6 1393 aaPredicted RBP19.95■□□□□ 0.78
SUMO1-208ENST00000409627 BAZ2AQ9UIF9 1905 aaKnown RBP19.94■□□□□ 0.78
SUMO1-208ENST00000409627 USP5P45974 858 aa19.94■□□□□ 0.78
SUMO1-208ENST00000409627 CCDC129Q6ZRS4 1044 aa19.94■□□□□ 0.78
SUMO1-208ENST00000409627 ZNF589Q86UQ0 364 aaPredicted RBP19.94■□□□□ 0.78
SUMO1-208ENST00000409627 TGFBRAP1Q8WUH2 860 aa19.94■□□□□ 0.78
SUMO1-208ENST00000409627 SLC4A4Q9Y6R1 1079 aa19.94■□□□□ 0.78
SUMO1-208ENST00000409627 FLT1P17948 1338 aa19.94■□□□□ 0.78
SUMO1-208ENST00000409627 LAMB1P07942 1786 aa19.93■□□□□ 0.78
SUMO1-208ENST00000409627 SGSM2O43147 1006 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms