RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 IFNL3Q8IZI9 196 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 TBC1D2Q9BYX2 928 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 ZBTB12Q9Y330 459 aaPredicted RBP18.65■□□□□ 0.58
SHANK2-204ENST00000409530 PCDHAC2Q9Y5I4 1007 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 LAMA4Q16363 1823 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 PSMD14O00487 310 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 ANAPC15P60006 121 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 IMMTQ16891 758 aaKnown RBP18.65■□□□□ 0.58
SHANK2-204ENST00000409530 STRIP1Q5VSL9 837 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 JDP2Q8WYK2 163 aa18.65■□□□□ 0.58
SHANK2-204ENST00000409530 CYP2D7A0A087X1C5 515 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 EPB41L2O43491 1005 aaKnown RBP18.64■□□□□ 0.57
SHANK2-204ENST00000409530 STOX1Q6ZVD7 989 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 ANP32EQ9BTT0 268 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 DAGLAQ9Y4D2 1042 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 PSME4Q14997 1843 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 MINDY4BA8MYZ0 360 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 PATL2C9JE40 543 aaKnown RBP18.64■□□□□ 0.57
SHANK2-204ENST00000409530 SMIM22K7EJ46 135 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 PRELPP51888 382 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 CTDSPL2Q05D32 466 aa18.64■□□□□ 0.57
SHANK2-204ENST00000409530 CRNKL1Q9BZJ0 848 aaKnown RBP18.64■□□□□ 0.57
SHANK2-204ENST00000409530 ZNF213O14771 459 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 USP5P45974 858 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 EVX2Q03828 476 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 BECN1Q14457 450 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 NACAP1Q9BZK3 213 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 CTNNA3Q9UI47 895 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 NAV1Q8NEY1 1877 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 CDK5RAP2Q96SN8 1893 aa18.63■□□□□ 0.57
SHANK2-204ENST00000409530 ST18O60284 1047 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 BAG3O95817 575 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 LDHCP07864 332 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 GNAT2P19087 354 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 LRRC2Q9BYS8 371 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 ZNRF3Q9ULT6 936 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 PICALMQ13492 652 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 CHST3Q7LGC8 479 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 TBC1D10CQ8IV04 446 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 MAPKAPK5Q8IW41 473 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 TGFBRAP1Q8WUH2 860 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 INCENPQ9NQS7 918 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 TOMM22Q9NS69 142 aa18.62■□□□□ 0.57
SHANK2-204ENST00000409530 E7EWF7 191 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 YBX3P16989 372 aaKnown RBP eCLIP18.61■□□□□ 0.571e-6■■■□□ 16.3
SHANK2-204ENST00000409530 TEX11Q8IYF3 940 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 TEKT1Q969V4 418 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 SAP30BPQ9UHR5 308 aaKnown RBP18.61■□□□□ 0.57
SHANK2-204ENST00000409530 CRKP46108 304 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 BLOC1S2Q6QNY1 142 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 SLF2Q8IX21 1173 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 NBPF3Q9H094 633 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 CYP46A1Q9Y6A2 500 aa18.61■□□□□ 0.57
SHANK2-204ENST00000409530 RPAP1Q9BWH6 1393 aaPredicted RBP18.6■□□□□ 0.57
SHANK2-204ENST00000409530 ZBTB22O15209 634 aa18.6■□□□□ 0.57
SHANK2-204ENST00000409530 CACNB3P54284 484 aa18.6■□□□□ 0.57
SHANK2-204ENST00000409530 RRP12Q5JTH9 1297 aaKnown RBP18.6■□□□□ 0.57
SHANK2-204ENST00000409530 GJA3Q9Y6H8 435 aa18.6■□□□□ 0.57
SHANK2-204ENST00000409530 LAMB1P07942 1786 aa18.6■□□□□ 0.57
SHANK2-204ENST00000409530 CYP2D6P10635 497 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 CXCL9Q07325 125 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 RSBN1LQ6PCB5 846 aaPredicted RBP18.59■□□□□ 0.57
SHANK2-204ENST00000409530 NEK1Q96PY6 1258 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 MCM9Q9NXL9 1143 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 KCNB2Q92953 911 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 DCP1AQ9NPI6 582 aaPredicted RBP18.59■□□□□ 0.57
SHANK2-204ENST00000409530 GAKO14976 1311 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 NEDD4P46934 1319 aa18.59■□□□□ 0.57
SHANK2-204ENST00000409530 USP17L8P0C7I0 530 aa18.58■□□□□ 0.57
SHANK2-204ENST00000409530 PSMA5P28066 241 aa18.58■□□□□ 0.57
SHANK2-204ENST00000409530 RUFY3Q7L099 469 aa18.58■□□□□ 0.57
SHANK2-204ENST00000409530 PDRG1Q9NUG6 133 aa18.58■□□□□ 0.57
SHANK2-204ENST00000409530 GPR75-ASB3A0A0A6YYF3 556 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 SHTN1A0MZ66 631 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 USP17L12C9JPN9 530 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 USP17L21D6R901 530 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 HSP90AA1P07900 732 aaKnown RBP18.58■□□□□ 0.56
SHANK2-204ENST00000409530 AK2P54819 239 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 PPARAQ07869 468 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 KRT32Q14532 448 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 CIAPIN1Q6FI81 312 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 RALYLQ86SE5 291 aaKnown RBP18.58■□□□□ 0.56
SHANK2-204ENST00000409530 SLKQ9H2G2 1235 aaPredicted RBP18.58■□□□□ 0.56
SHANK2-204ENST00000409530 SUGT1Q9Y2Z0 365 aa18.58■□□□□ 0.56
SHANK2-204ENST00000409530 FGD1P98174 961 aa18.57■□□□□ 0.56
SHANK2-204ENST00000409530 ZSWIM6Q9HCJ5 1215 aa18.57■□□□□ 0.56
SHANK2-204ENST00000409530 USP40Q9NVE5 1235 aa18.57■□□□□ 0.56
SHANK2-204ENST00000409530 ECM29Q5VYK3 1845 aa18.57■□□□□ 0.56
SHANK2-204ENST00000409530 K7ELQ4 463 aaPredicted RBP18.56■□□□□ 0.56
SHANK2-204ENST00000409530 PRDM1O75626 825 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 RPS6KB1P23443 525 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 CTR9Q6PD62 1173 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 NKX2-3Q8TAU0 364 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 ZNF541Q9H0D2 1346 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 B4E1Z4 1266 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 DTNBO60941 627 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 RHBDL3P58872 404 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 CFAP100Q494V2 611 aa18.56■□□□□ 0.56
SHANK2-204ENST00000409530 FLT1P17948 1338 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms