RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 MCM7P33993 719 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 ADCY7P51828 1080 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 SMTNP53814 917 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 MRPS9P82933 396 aaKnown RBP5.71□□□□□ -1.5
SCN3A-203ENST00000409101 SLC10A4Q96EP9 437 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 LZTS2Q9BRK4 669 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 ZSCAN16Q9H4T2 348 aaPredicted RBP5.71□□□□□ -1.5
SCN3A-203ENST00000409101 DBNDD1Q9H9R9 158 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 MLXIPQ9HAP2 919 aa5.71□□□□□ -1.5
SCN3A-203ENST00000409101 USP6P35125 1406 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CLRN2A0PK11 232 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 ASIC1P78348 528 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 MKRN3Q13064 507 aaKnown RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 RRAGBQ5VZM2 374 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 TTLL7Q6ZT98 887 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CHST3Q7LGC8 479 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 ESYT1Q9BSJ8 1104 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 GINS2Q9Y248 185 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 DDX39AO00148 427 aaKnown RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 LMAN1P49257 510 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 R3HDM1Q15032 1099 aaKnown RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 GNPTABQ3T906 1256 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC102BQ68D86 513 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 MSANTD4Q8NCY6 345 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 TRIM47Q96LD4 638 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 MRVI1Q9Y6F6 885 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 MACROD2A1Z1Q3 448 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 GIGYF1O75420 1035 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 TNNT1P13805 278 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 PDE4DQ08499 809 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 KCTD2Q14681 263 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CERKLQ49MI3 558 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 AKNAD1Q5T1N1 836 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC112Q8NEF3 446 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CLIP2Q9UDT6 1046 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 MBD5Q9P267 1494 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 TRIM75PA6NK02 468 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 RAD17O75943 681 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 GYG1P46976 350 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 MRE11P49959 708 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 KLHDC4Q8TBB5 520 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 APPBP2Q92624 585 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 DBNDD2Q9BQY9 259 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 SRP68Q9UHB9 627 aaKnown RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 PALM3A6NDB9 673 aaPredicted RBP5.7□□□□□ -1.5
SCN3A-203ENST00000409101 C21orf2O43822 256 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 AP5M1Q9H0R1 490 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 EXOC7Q9UPT5 735 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 ZBTB1Q9Y2K1 713 aa5.7□□□□□ -1.5
SCN3A-203ENST00000409101 CCDC169A6NNP5 214 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 KCNQ3O43525 872 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 RPS6KA4O75676 772 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 HARSP12081 509 aaKnown RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 CTDSPL2Q05D32 466 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ARHGAP29Q52LW3 1261 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 MCF2L2Q86YR7 1114 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ANKRD35Q8N283 1001 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 TTC12Q9H892 705 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ZNF532Q9HCE3 1301 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 USO1O60763 962 aaKnown RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 CFBP00751 764 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 SLC8A3P57103 927 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 FNBP4Q8N3X1 1017 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ZMYND15Q9H091 742 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 FLOT1O75955 427 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 CCT6AP40227 531 aaKnown RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 AFMP43652 599 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 APOBRQ0VD83 1088 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 HS2ST1Q7LGA3 356 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 TMEM87BQ96K49 555 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 MYOM2P54296 1465 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 USP17L3A6NCW0 530 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 USP17L4A6NCW7 530 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 B4E1Z4 1266 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 EZRP15311 586 aaKnown RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ZAP70P43403 619 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 VPS72Q15906 364 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 LETM2Q2VYF4 491 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 CREB3L3Q68CJ9 461 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 HAUS3Q68CZ6 603 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 USP17L1Q7RTZ2 530 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 FAM177A1Q8N128 213 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 NECAB1Q8N987 351 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 PIGBQ92521 554 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 TRPC6Q9Y210 931 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 KDM2BQ8NHM5 1336 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 IBTKQ9P2D0 1353 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ERBB3P21860 1342 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 IQCA1LA6NCM1 817 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 GPAA1O43292 621 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 FMNL1O95466 1100 aaPredicted RBP5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ALAS1P13196 640 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 RXRAP19793 462 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 ABCB5Q2M3G0 1257 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 KMT5BQ4FZB7 885 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 DTHD1Q6ZMT9 781 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 HOOK3Q86VS8 718 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 GOLGA1Q92805 767 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 GLG1Q92896 1179 aa5.69□□□□□ -1.5
SCN3A-203ENST00000409101 TOP1P11387 765 aaKnown RBP5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms