RNA–Protein interactions for RNA: ENST00000409096.5

CUL3-203, Transcript of cullin 3, humanhuman

TSL 1 (best) BASIC

Gene CUL3, Length 2,701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-203ENST00000409096 MIR1-1HGQ9H1L0 117 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 CCDC86Q9H6F5 360 aaKnown RBP4.29□□□□□ -1.72
CUL3-203ENST00000409096 RRAGCQ9HB90 399 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 WISP1O95388 367 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 RLBP1P12271 317 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 PIP4K2BP78356 416 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 ILDR2Q71H61 639 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 GPBAR1Q8TDU6 330 aa4.29□□□□□ -1.72
CUL3-203ENST00000409096 LOC100289279A0A1B0GTE1 492 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 GRIN3BO60391 1043 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 INPP5AQ14642 412 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 SF3A1Q15459 793 aaKnown RBP4.28□□□□□ -1.72
CUL3-203ENST00000409096 GATAD2BQ8WXI9 593 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 NT5C1AQ9BXI3 368 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 ZNF862O60290 1169 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 LIG1P18858 919 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 ATP2B1P20020 1258 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 LMNB1P20700 586 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 UBASH3BQ8TF42 649 aa4.28□□□□□ -1.72
CUL3-203ENST00000409096 CILPO75339 1184 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 POU4F3Q15319 338 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 REC114Q7Z4M0 266 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 NEDD1Q8NHV4 660 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 UBXN4Q92575 508 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 ZNF408Q9H9D4 720 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 BRMS1Q9HCU9 246 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 PRDM6Q9NQX0 595 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 CYP8B1Q9UNU6 501 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 LORP23490 312 aaPredicted RBP4.27□□□□□ -1.73
CUL3-203ENST00000409096 ETFBP38117 255 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 PDE3AQ14432 1141 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 TRAPPC3LQ5T215 181 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 FAM117BQ6P1L5 589 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 TREML4Q6UXN2 200 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 GK5Q6ZS86 529 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 FAM169BQ8N8A8 192 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 ACSBG1Q96GR2 724 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 CORO1BQ9BR76 489 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 SOX17Q9H6I2 414 aaPredicted RBP4.27□□□□□ -1.73
CUL3-203ENST00000409096 POLR3KQ9Y2Y1 108 aaPredicted RBP4.27□□□□□ -1.73
CUL3-203ENST00000409096 CORINQ9Y5Q5 1042 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 CSADQ9Y600 493 aa4.27□□□□□ -1.73
CUL3-203ENST00000409096 DLL1O00548 723 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 MCM4P33991 863 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 SOX9P48436 509 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 AP3B2Q13367 1082 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 PMFBP1Q8TBY8 1022 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 NKD1Q969G9 470 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 PLPPR2Q96GM1 343 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 CACNA2D2Q9NY47 1150 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 PCDHA4Q9UN74 947 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 A0A0A0MRY4 1105 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 DCDC2CA8MYV0 355 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 CYP11A1P05108 521 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 CD68P34810 354 aaPredicted RBP4.26□□□□□ -1.73
CUL3-203ENST00000409096 CLCQ05315 142 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 WIPI1Q5MNZ9 446 aaPredicted RBP4.26□□□□□ -1.73
CUL3-203ENST00000409096 LRFN4Q6PJG9 635 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 SHISA2Q6UWI4 295 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 LINC00114Q6XXX2 140 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 SLITRK4Q8IW52 837 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 ANTXR1Q9H6X2 564 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 SAMM50Q9Y512 469 aa4.26□□□□□ -1.73
CUL3-203ENST00000409096 RBAK-RBAKDNI3L0D1 243 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 ARHGEF15O94989 841 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 FMR1NBQ8N0W7 255 aaPredicted RBP4.25□□□□□ -1.73
CUL3-203ENST00000409096 ANAPC16Q96DE5 110 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 PLVAPQ9BX97 442 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 LNPKQ9C0E8 428 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 OSGEPQ9NPF4 335 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 LRRC4BQ9NT99 713 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 DNAJA2O60884 412 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 TRIM37O94972 964 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 SSBP05455 408 aaKnown RBP eCLIP4.25□□□□□ -1.73
CUL3-203ENST00000409096 ARL4DP49703 201 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 MPP2Q14168 576 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 SUZ12Q15022 739 aaKnown RBP4.25□□□□□ -1.73
CUL3-203ENST00000409096 LRRC14Q15048 493 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 FBXW10Q5XX13 1052 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 DPH6Q7L8W6 267 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 C12orf40Q86WS4 652 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 VPS37DQ86XT2 251 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 CACTIN-AS1Q8N1I8 211 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 KLHL23Q8NBE8 558 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 WNT8BQ93098 351 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 SHDQ96IW2 340 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 WDR18Q9BV38 432 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 LRRC3Q9BY71 257 aa4.25□□□□□ -1.73
CUL3-203ENST00000409096 RPL6Q02878 288 aaKnown RBP4.24□□□□□ -1.73
CUL3-203ENST00000409096 GRIK4Q16099 956 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 CWF19L2Q2TBE0 894 aaKnown RBP4.24□□□□□ -1.73
CUL3-203ENST00000409096 AGGF1Q8N302 714 aaeCLIP4.24□□□□□ -1.733e-15■■■□□ 15
CUL3-203ENST00000409096 SEC16BQ96JE7 1060 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 EMILIN2Q9BXX0 1053 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 PCDHGC5Q9Y5F6 944 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 PRAMEF27A3QJZ7 478 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 GFRA2O00451 464 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 BPNT1O95861 308 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 DRD2P14416 443 aa4.24□□□□□ -1.73
CUL3-203ENST00000409096 RUFY4Q6ZNE9 571 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms