RNA–Protein interactions for RNA: ENST00000409033.7

ATG9A-203, Transcript of autophagy related 9A, humanhuman

TSL 1 (best)

Gene ATG9A, Length 3,701 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-203ENST00000409033 SLC51AQ86UW1 340 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 VAT1LQ9HCJ6 419 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 CARMIL3Q8ND23 1372 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.53□□□□□ -0.08
ATG9A-203ENST00000409033 PATL2C9JE40 543 aaKnown RBP14.53□□□□□ -0.08
ATG9A-203ENST00000409033 PRDX5P30044 214 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 PICALMQ13492 652 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 AKNAD1Q5T1N1 836 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 IFIT1BQ5T764 474 aaKnown RBP14.53□□□□□ -0.08
ATG9A-203ENST00000409033 FAM13BQ9NYF5 915 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 FBXO3Q9UK99 471 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 PHRF1Q9P1Y6 1649 aaKnown RBP14.53□□□□□ -0.08
ATG9A-203ENST00000409033 SPTLC2O15270 562 aa14.53□□□□□ -0.08
ATG9A-203ENST00000409033 PES1O00541 588 aaKnown RBP14.52□□□□□ -0.08
ATG9A-203ENST00000409033 NTSR2O95665 410 aa14.52□□□□□ -0.08
ATG9A-203ENST00000409033 RBM5P52756 815 aaKnown RBP eCLIP14.52□□□□□ -0.08
ATG9A-203ENST00000409033 UBE3CQ15386 1083 aa14.52□□□□□ -0.08
ATG9A-203ENST00000409033 DIXDC1Q155Q3 683 aa14.52□□□□□ -0.08
ATG9A-203ENST00000409033 KRT40Q6A162 431 aa14.52□□□□□ -0.08
ATG9A-203ENST00000409033 ARHGEF1Q92888 912 aaKnown RBP14.52□□□□□ -0.08
ATG9A-203ENST00000409033 UFL1O94874 794 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 CTDNEP1O95476 244 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 RESTQ13127 1097 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 APOA5Q6Q788 366 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 HOMER1Q86YM7 354 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 ESR2Q92731 530 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 PGBD1Q96JS3 809 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 RNF41Q9H4P4 317 aaPredicted RBP14.52□□□□□ -0.09
ATG9A-203ENST00000409033 KRT23Q9C075 422 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 NYXQ9GZU5 481 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 SCN11AQ9UI33 1791 aa14.52□□□□□ -0.09
ATG9A-203ENST00000409033 PPARAQ07869 468 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 SEPT12Q8IYM1 358 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 MRPS27Q92552 414 aaKnown RBP14.51□□□□□ -0.09
ATG9A-203ENST00000409033 ZNF274Q96GC6 653 aaPredicted RBP14.51□□□□□ -0.09
ATG9A-203ENST00000409033 PLA2G12BQ9BX93 195 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 MINPP1Q9UNW1 487 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 ANTXR2P58335 489 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 ZNF622Q969S3 477 aaKnown RBP eCLIP14.51□□□□□ -0.09
ATG9A-203ENST00000409033 THRAP3Q9Y2W1 955 aaKnown RBP14.51□□□□□ -0.09
ATG9A-203ENST00000409033 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.51□□□□□ -0.098e-8■■■■□ 25.3
ATG9A-203ENST00000409033 CATIPQ7Z7H3 387 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 FAM200AQ8TCP9 573 aa14.51□□□□□ -0.09
ATG9A-203ENST00000409033 PPP1R1BQ9UD71 204 aaPredicted RBP14.51□□□□□ -0.09
ATG9A-203ENST00000409033 SLC3A2P08195 630 aaKnown RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CTCFLQ8NI51 663 aaPredicted RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CLIC6Q96NY7 704 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 LLPHQ9BRT6 129 aaKnown RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CRNKL1Q9BZJ0 848 aaKnown RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CYP2D6P10635 497 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 MAPKAPK5Q8IW41 473 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 MB21D2Q8IYB1 491 aaPredicted RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CEP57L1Q8IYX8 460 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 AOPEPQ8N6M6 819 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 EPB41L4AQ9HCS5 686 aaPredicted RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 VPS54Q9P1Q0 977 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 XBP1P17861 261 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CDC27P30260 824 aa14.5□□□□□ -0.09
ATG9A-203ENST00000409033 EXOSC10Q01780 885 aaKnown RBP14.5□□□□□ -0.09
ATG9A-203ENST00000409033 CDK11BP21127 795 aaKnown RBP14.49□□□□□ -0.09
ATG9A-203ENST00000409033 CLCN1P35523 988 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 EIF6P56537 245 aaKnown RBP14.49□□□□□ -0.09
ATG9A-203ENST00000409033 CNNM2Q9H8M5 875 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 V9GY48 417 aaPredicted RBP14.49□□□□□ -0.09
ATG9A-203ENST00000409033 TNKSO95271 1327 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 AFF2P51816 1311 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 NMT2O60551 498 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 MRC1P22897 1456 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 MYSM1Q5VVJ2 828 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 QTRT2Q9H974 415 aaKnown RBP14.49□□□□□ -0.09
ATG9A-203ENST00000409033 CBX8Q9HC52 389 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 LDHBP07195 334 aaKnown RBP14.49□□□□□ -0.09
ATG9A-203ENST00000409033 PTGS1P23219 599 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 TPM4P67936 248 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 CCDC186Q7Z3E2 898 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 DIS3L2Q8IYB7 885 aaKnown RBP14.49□□□□□ -0.09
ATG9A-203ENST00000409033 JMYQ8N9B5 988 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 FBXO18Q8NFZ0 1043 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 CABP5Q9NP86 173 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 PCDHA7Q9UN72 937 aa14.49□□□□□ -0.09
ATG9A-203ENST00000409033 GSG1L2A8MUP6 293 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 PTPN21Q16825 1174 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 ZSCAN29Q8IWY8 852 aaPredicted RBP14.48□□□□□ -0.09
ATG9A-203ENST00000409033 KCNB2Q92953 911 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 SYKP43405 635 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 TSGA10IPQ3SY00 556 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 TNS2Q63HR2 1409 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 ZNF804BA4D1E1 1349 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 ANO1Q5XXA6 986 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.48□□□□□ -0.09
ATG9A-203ENST00000409033 TXNRD3Q86VQ6 643 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 ZNF654Q8IZM8 581 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 TGFBRAP1Q8WUH2 860 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 CLSTN2Q9H4D0 955 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 CLIP2Q9UDT6 1046 aa14.48□□□□□ -0.09
ATG9A-203ENST00000409033 LMOD1P29536 600 aaPredicted RBP14.47□□□□□ -0.09
ATG9A-203ENST00000409033 ST5P78524 1137 aa14.47□□□□□ -0.09
ATG9A-203ENST00000409033 NR5A1Q13285 461 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms