RNA–Protein interactions for RNA: ENST00000408999.3

RGPD4-201, Transcript of RANBP2-like and GRIP domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD4, Length 5,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4-201ENST00000408999 MYH2Q9UKX2 1941 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 ABL1P00519 1130 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 LIG1P18858 919 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 WDR78Q5VTH9 848 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 TMTC2Q8N394 836 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 CCDC148Q8NFR7 591 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 VEZTQ9HBM0 779 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 FEZ2Q9UHY8 353 aaPredicted RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 AKAP13Q12802 2813 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 ABCC4O15439 1325 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 KIF1AQ12756 1690 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 PNMA6EA0A0J9YXQ4 647 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 USP27XA6NNY8 438 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 PATL2C9JE40 543 aaKnown RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 KRT2P35908 639 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 TMEM62Q0P6H9 643 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 USP48Q86UV5 1035 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 EYA3Q99504 573 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 ARMT1Q9H993 441 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 TCP11L1Q9NUJ3 509 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 LMBRD1Q9NUN5 540 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 BSNQ9UPA5 3926 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 UQCRHLA0A096LP55 91 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 ZNF500O60304 480 aaPredicted RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 UQCRHP07919 91 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 CALM1P0DP23 149 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 CALM2P0DP24 149 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 CALM3P0DP25 149 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 TOP1P11387 765 aaKnown RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 NAPAP54920 295 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 AMPD3Q01432 767 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 NCBP1Q09161 790 aaKnown RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 GCKRQ14397 625 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 ISM2Q6H9L7 571 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 DNAJC10Q8IXB1 793 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 NUP88Q99567 741 aaPredicted RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 PYM1Q9BRP8 204 aaKnown RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 PYCARDQ9ULZ3 195 aa4.34□□□□□ -1.71
RGPD4-201ENST00000408999 COL3A1P02461 1466 aaPredicted RBP4.34□□□□□ -1.71
RGPD4-201ENST00000408999 RIMBP3CA6NJZ7 1639 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 RIMBP3BA6NNM3 1639 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 RIMBP3Q9UFD9 1639 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 A0A087WWV3 80 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 NEURL1BA8MQ27 555 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 SLC27A2O14975 620 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 TAF5LO75529 589 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 FGFR1OPO95684 399 aaKnown RBP4.34□□□□□ -1.72
RGPD4-201ENST00000408999 NBPF7P0C2Y1 421 aaPredicted RBP4.34□□□□□ -1.72
RGPD4-201ENST00000408999 PLCG2P16885 1265 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 RXRAP19793 462 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 CASQ1P31415 396 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 RBM25P49756 843 aaKnown RBP4.34□□□□□ -1.72
RGPD4-201ENST00000408999 IQCEQ6IPM2 695 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 RRP36Q96EU6 259 aaKnown RBP4.34□□□□□ -1.72
RGPD4-201ENST00000408999 ZNF496Q96IT1 587 aaPredicted RBP4.34□□□□□ -1.72
RGPD4-201ENST00000408999 EPC1Q9H2F5 836 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 USP25Q9UHP3 1055 aa4.34□□□□□ -1.72
RGPD4-201ENST00000408999 MROH5Q6ZUA9 1318 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SH3TC1Q8TE82 1336 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 PTPDC1A2A3K4 754 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 RPS6KB1P23443 525 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 NBPF14Q5TI25 921 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 IL17REQ8NFR9 667 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 DBNDD2Q9BQY9 259 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 ZKSCAN3Q9BRR0 538 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 EXOC1Q9NV70 894 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 STK32BQ9NY57 414 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 ANKARQ7Z5J8 1434 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 PRR36Q9H6K5 1346 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SFPQP23246 707 aaKnown RBP eCLIP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 STAT6P42226 847 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SPA17Q15506 151 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 KANK3Q6NY19 840 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 CACNA2D4Q7Z3S7 1137 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 OGFOD1Q8N543 542 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 TMX1Q9H3N1 280 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 RBM28Q9NW13 759 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SAMM50Q9Y512 469 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 ERLIN2O94905 339 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 HIBADHP31937 336 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 SYKP43405 635 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 DNM1Q05193 864 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 ARHGAP29Q52LW3 1261 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 RBM26Q5T8P6 1007 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 JAKMIP3Q5VZ66 844 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 TMC6Q7Z403 805 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 KCNG4Q8TDN1 519 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 GGA1Q9UJY5 639 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 NEURL4Q96JN8 1562 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 OTOGQ6ZRI0 2925 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 KIF20AO95235 890 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 MARCKSP29966 332 aaPredicted RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 CTSWP56202 376 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 TIMM10P62072 90 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 KLHL40Q2TBA0 621 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 ZC3H12AQ5D1E8 599 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 CCDC102BQ68D86 513 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 GIMAP6Q6P9H5 292 aa4.33□□□□□ -1.72
RGPD4-201ENST00000408999 DHX32Q7L7V1 743 aaKnown RBP4.33□□□□□ -1.72
RGPD4-201ENST00000408999 FAM228AQ86W67 206 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms