RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 RBM6P78332 1123 aaKnown RBP28.91■■■□□ 2.22
DNMT3A-206ENST00000406659 NKX2-3Q8TAU0 364 aa28.91■■■□□ 2.22
DNMT3A-206ENST00000406659 STAG1Q8WVM7 1258 aa28.91■■■□□ 2.22
DNMT3A-206ENST00000406659 TFIP11Q9UBB9 837 aaKnown RBP28.91■■■□□ 2.22
DNMT3A-206ENST00000406659 ELP1O95163 1332 aa28.91■■■□□ 2.22
DNMT3A-206ENST00000406659 TMEM67Q5HYA8 995 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 CCDC183Q5T5S1 534 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 TTC6Q86TZ1 520 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 IGDCC4Q8TDY8 1250 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 RIOK1Q9BRS2 568 aaKnown RBP28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 CACNA1SQ13698 1873 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 TIAM2Q8IVF5 1701 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 CHD4Q14839 1912 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 MYH13Q9UKX3 1938 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 PPFIA3O75145 1194 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 KDM4AO75164 1064 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 ZNF772Q68DY9 489 aaPredicted RBP28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 NFXL1Q6ZNB6 911 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 RAB11FIP4Q86YS3 637 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 SPATA32Q96LK8 384 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 RNF41Q9H4P4 317 aaPredicted RBP28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 ZSWIM5Q9P217 1185 aa28.9■■■□□ 2.22
DNMT3A-206ENST00000406659 XDHP47989 1333 aa28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 NASPP49321 788 aaPredicted RBP28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 TXNRD3Q86VQ6 643 aa28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 SDR42E1Q8WUS8 393 aa28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 RBM17Q96I25 401 aaKnown RBP28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 TOMM22Q9NS69 142 aa28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 TACC3Q9Y6A5 838 aa28.89■■■□□ 2.22
DNMT3A-206ENST00000406659 IRS2Q9Y4H2 1338 aa28.89■■■□□ 2.21
DNMT3A-206ENST00000406659 IFIT3O14879 490 aaKnown RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 ZBTB22O15209 634 aa28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 FDPSP14324 419 aaKnown RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 DYNLL1P63167 89 aaKnown RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 MECOMQ03112 1051 aa28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 PPARAQ07869 468 aa28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 PROM2Q8N271 834 aa28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 NSUN4Q96CB9 384 aaKnown RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 LETM1O95202 739 aaPredicted RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 METAP2P50579 478 aaKnown RBP eCLIP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 CRY2Q49AN0 593 aa28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 RRP12Q5JTH9 1297 aaKnown RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 SPTY2D1Q68D10 685 aaPredicted RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 LY9Q9HBG7 655 aa28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 ORC3Q9UBD5 711 aaPredicted RBP28.88■■■□□ 2.21
DNMT3A-206ENST00000406659 APOA5Q6Q788 366 aa28.87■■■□□ 2.21
DNMT3A-206ENST00000406659 ZNF384Q8TF68 577 aa28.87■■■□□ 2.21
DNMT3A-206ENST00000406659 LEO1Q8WVC0 666 aaPredicted RBP28.87■■■□□ 2.21
DNMT3A-206ENST00000406659 MINDY4BA8MYZ0 360 aa28.86■■■□□ 2.21
DNMT3A-206ENST00000406659 LIFRP42702 1097 aa28.86■■■□□ 2.21
DNMT3A-206ENST00000406659 TMED8Q6PL24 325 aaPredicted RBP28.86■■■□□ 2.21
DNMT3A-206ENST00000406659 RBSNQ9H1K0 784 aa28.86■■■□□ 2.21
DNMT3A-206ENST00000406659 CFAP45Q9UL16 551 aa28.86■■■□□ 2.21
DNMT3A-206ENST00000406659 SART3Q15020 963 aaKnown RBP28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 SGMS1Q86VZ5 419 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 BRIP1Q9BX63 1249 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 ANAPC4Q9UJX5 808 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 GOLGA6L4A6NEF3 574 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 ZBTB43O43298 467 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 GUCY1B3Q02153 619 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 CPLX2Q6PUV4 134 aaKnown RBP28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 ANP32BQ92688 251 aaKnown RBP28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 TSPY26PQ9H489 355 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 SENP2Q9HC62 589 aa28.85■■■□□ 2.21
DNMT3A-206ENST00000406659 CCDC69A6NI79 296 aa28.84■■■□□ 2.21
DNMT3A-206ENST00000406659 CDKL5O76039 1030 aa28.84■■■□□ 2.21
DNMT3A-206ENST00000406659 DDR1Q08345 913 aa28.84■■■□□ 2.21
DNMT3A-206ENST00000406659 ZNF804AQ7Z570 1209 aa28.84■■■□□ 2.21
DNMT3A-206ENST00000406659 STK11IPQ8N1F8 1099 aa28.84■■■□□ 2.21
DNMT3A-206ENST00000406659 C8orf76Q96K31 380 aa28.84■■■□□ 2.21
DNMT3A-206ENST00000406659 POLRMTO00411 1230 aaKnown RBP28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 GIMAP6Q6P9H5 292 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 SYNE3Q6ZMZ3 975 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 PRDX5P30044 214 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 GPSM2P81274 684 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 WDR66Q8TBY9 1149 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 MTA3Q9BTC8 594 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 SLC12A7Q9Y666 1083 aa28.83■■■□□ 2.21
DNMT3A-206ENST00000406659 ERICH2A1L162 156 aa28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 GOLGA8AA7E2F4 631 aa28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 BBOX1O75936 387 aa28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 C15orf52Q6ZUT6 534 aaKnown RBP28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 SLC51AQ86UW1 340 aa28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 MICU3Q86XE3 530 aa28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 ZNF396Q96N95 335 aaPredicted RBP28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 CRNKL1Q9BZJ0 848 aaKnown RBP28.82■■■□□ 2.2
DNMT3A-206ENST00000406659 ATP2B4P23634 1241 aa28.81■■■□□ 2.2
DNMT3A-206ENST00000406659 ADD1P35611 737 aaKnown RBP28.81■■■□□ 2.2
DNMT3A-206ENST00000406659 ATL3Q6DD88 541 aa28.81■■■□□ 2.2
DNMT3A-206ENST00000406659 DZIP1Q86YF9 867 aaKnown RBP28.81■■■□□ 2.2
DNMT3A-206ENST00000406659 TDRD7Q8NHU6 1098 aaKnown RBP28.81■■■□□ 2.2
DNMT3A-206ENST00000406659 JAG2Q9Y219 1238 aa28.81■■■□□ 2.2
DNMT3A-206ENST00000406659 PLSCR1O15162 318 aa28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 APBA3O96018 575 aa28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 RXRAP19793 462 aa28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 WTAPQ15007 396 aa28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 IGSF3O75054 1194 aa28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 HOXA10P31260 410 aaPredicted RBP28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 TMTC2Q8N394 836 aa28.8■■■□□ 2.2
DNMT3A-206ENST00000406659 ESR2Q92731 530 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms