RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 DENND4BO75064 1496 aaPredicted RBP13.49□□□□□ -0.25
SMCR8-201ENST00000406438 ECM2O94769 699 aaPredicted RBP13.49□□□□□ -0.25
SMCR8-201ENST00000406438 ATL3Q6DD88 541 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 C8orf37Q96NL8 207 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 FAM204AQ9H8W3 233 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 TTC36A6NLP5 189 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 STRN3Q13033 797 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 DDB1Q16531 1140 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 BIRC3Q13489 604 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 RBM26Q5T8P6 1007 aaKnown RBP13.49□□□□□ -0.25
SMCR8-201ENST00000406438 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 GSDMBQ8TAX9 411 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 LEO1Q8WVC0 666 aaPredicted RBP13.49□□□□□ -0.25
SMCR8-201ENST00000406438 NACA2Q9H009 215 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 TMOD4Q9NZQ9 345 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 PRXQ9BXM0 1461 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 ELP1O95163 1332 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 TRPC3Q13507 836 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
SMCR8-201ENST00000406438 HSPA1LP34931 641 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 AKAP4Q5JQC9 854 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 ACTN4O43707 911 aaKnown RBP13.49□□□□□ -0.25
SMCR8-201ENST00000406438 CHST3Q7LGC8 479 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 CCDC125Q86Z20 511 aa13.49□□□□□ -0.25
SMCR8-201ENST00000406438 NOP56O00567 594 aaKnown RBP13.48□□□□□ -0.25
SMCR8-201ENST00000406438 RUFY3Q7L099 469 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 MEIS3Q99687 375 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 SPOPO43791 374 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 LIN9Q5TKA1 542 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 KIF3CO14782 793 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 DNAJC21Q5F1R6 531 aaKnown RBP13.48□□□□□ -0.25
SMCR8-201ENST00000406438 NBPF11Q86T75 865 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 ZHX1Q9UKY1 873 aaPredicted RBP13.48□□□□□ -0.25
SMCR8-201ENST00000406438 TACC3Q9Y6A5 838 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 AKR1B15C9JRZ8 316 aaPredicted RBP13.48□□□□□ -0.25
SMCR8-201ENST00000406438 ALDH1L1O75891 902 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 TTC31Q49AM3 519 aaPredicted RBP13.48□□□□□ -0.25
SMCR8-201ENST00000406438 B4GALNT4Q76KP1 1039 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 MIGA1Q8NAN2 632 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 NSFL1CQ9UNZ2 370 aaKnown RBP13.48□□□□□ -0.25
SMCR8-201ENST00000406438 TLDC2A0PJX2 215 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 VWA3AA6NCI4 1184 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 ANXA1P04083 346 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 LMBR1LQ6UX01 489 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 TFCP2L1Q9NZI6 479 aa13.48□□□□□ -0.25
SMCR8-201ENST00000406438 CCT6AP40227 531 aaKnown RBP13.47□□□□□ -0.25
SMCR8-201ENST00000406438 PPP1R21Q6ZMI0 780 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 ZKSCAN3Q9BRR0 538 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 TOM1O60784 492 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 NMIQ13287 307 aaPredicted RBP13.47□□□□□ -0.25
SMCR8-201ENST00000406438 IDI1Q13907 227 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 CEP85LQ5SZL2 805 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 HAUS3Q68CZ6 603 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 RBM17Q96I25 401 aaKnown RBP13.47□□□□□ -0.25
SMCR8-201ENST00000406438 CTNND2Q9UQB3 1225 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 RNF113AO15541 343 aaKnown RBP13.47□□□□□ -0.25
SMCR8-201ENST00000406438 PLCD1P51178 756 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 CCDC122Q5T0U0 273 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 RSRC1Q96IZ7 334 aaKnown RBP13.47□□□□□ -0.25
SMCR8-201ENST00000406438 IFNKQ9P0W0 207 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 SBNO2Q9Y2G9 1366 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 ADGRF5Q8IZF2 1346 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 TRIM14Q14142 442 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 TRAF5O00463 557 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 KARSQ15046 597 aaKnown RBP13.47□□□□□ -0.25
SMCR8-201ENST00000406438 GLT8D2Q9H1C3 349 aa13.47□□□□□ -0.25
SMCR8-201ENST00000406438 CCDC169A6NNP5 214 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 VIMP08670 466 aaKnown RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 WDR66Q8TBY9 1149 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 TCEANC2Q96MN5 208 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 VCX3BQ9H321 246 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 NOC2LQ9Y3T9 749 aaKnown RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 RPRD2Q5VT52 1461 aaKnown RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 DHX32Q7L7V1 743 aaKnown RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 EXOC7Q9UPT5 735 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 GBP1P32455 592 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 CREB3L3Q68CJ9 461 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 NSMCE1Q8WV22 266 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 BAG1Q99933 345 aaPredicted RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 STX17P56962 302 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 SDCCAG8Q86SQ7 713 aaPredicted RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 CERS3Q8IU89 383 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 NUF2Q9BZD4 464 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 PLB1Q6P1J6 1458 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 THOC2Q8NI27 1593 aaKnown RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 DKC1O60832 514 aaKnown RBP eCLIP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 APOBRQ0VD83 1088 aa13.46□□□□□ -0.25
SMCR8-201ENST00000406438 NOC4LQ9BVI4 516 aaKnown RBP13.46□□□□□ -0.25
SMCR8-201ENST00000406438 RIMBP2O15034 1052 aa13.46□□□□□ -0.26
SMCR8-201ENST00000406438 SEPT14Q6ZU15 432 aa13.46□□□□□ -0.26
SMCR8-201ENST00000406438 TAOK1Q7L7X3 1001 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 NOX5Q96PH1 765 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 HARSP12081 509 aaKnown RBP13.45□□□□□ -0.26
SMCR8-201ENST00000406438 CACNA2D3Q8IZS8 1091 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 IL2RBP14784 551 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 NBPF14Q5TI25 921 aa13.45□□□□□ -0.26
SMCR8-201ENST00000406438 IRS4O14654 1257 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms