RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 NEDD4P46934 1319 aa34.13■■■■□ 3.05
CSNK1E-205ENST00000405675 PPEF1O14829 653 aaPredicted RBP34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 SEMA3EO15041 775 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 PDIA4P13667 645 aaKnown RBP34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 WDR19Q8NEZ3 1342 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 CACNA1SQ13698 1873 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 MBD3O95983 291 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 GNAT2P19087 354 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 CTDSPL2Q05D32 466 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 TRDNQ13061 729 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 ZSCAN23Q3MJ62 389 aa34.12■■■■□ 3.05
CSNK1E-205ENST00000405675 PTPDC1A2A3K4 754 aa34.11■■■■□ 3.05
CSNK1E-205ENST00000405675 XRCC6P12956 609 aaKnown RBP eCLIP34.11■■■■□ 3.05
CSNK1E-205ENST00000405675 GPR101Q96P66 508 aaPredicted RBP34.11■■■■□ 3.05
CSNK1E-205ENST00000405675 TMEM63CQ9P1W3 806 aa34.11■■■■□ 3.05
CSNK1E-205ENST00000405675 MASTLQ96GX5 879 aa34.1■■■■□ 3.05
CSNK1E-205ENST00000405675 COL11A2P13942 1736 aaPredicted RBP34.1■■■■□ 3.05
CSNK1E-205ENST00000405675 B4E1Z4 1266 aa34.1■■■■□ 3.05
CSNK1E-205ENST00000405675 KLF18A0A0U1RQI7 1052 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 FIBPO43427 364 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 C2CD5Q86YS7 1000 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 MAGEB6P1A0A0J9YX57 407 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 ALDH1B1P30837 517 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 SP8Q8IXZ3 490 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 HPS5Q9UPZ3 1129 aa34.09■■■■□ 3.05
CSNK1E-205ENST00000405675 SALL1Q9NSC2 1324 aa34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 PPFIA3O75145 1194 aa34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 UFL1O94874 794 aa34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 FAM173BQ6P4H8 233 aa34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 TMC4Q7Z404 712 aa34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 ZNF622Q969S3 477 aaKnown RBP eCLIP34.08■■■■□ 3.055e-7■■□□□ 14.1
CSNK1E-205ENST00000405675 RIOK1Q9BRS2 568 aaKnown RBP34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 PDS5AQ29RF7 1337 aaKnown RBP34.08■■■■□ 3.05
CSNK1E-205ENST00000405675 TDO2P48775 406 aa34.07■■■■□ 3.05
CSNK1E-205ENST00000405675 CHAF1AQ13111 956 aaPredicted RBP34.07■■■■□ 3.05
CSNK1E-205ENST00000405675 ATP6V0A2Q9Y487 856 aa34.07■■■■□ 3.05
CSNK1E-205ENST00000405675 RAB11FIP4Q86YS3 637 aa34.07■■■■□ 3.04
CSNK1E-205ENST00000405675 FAM184AQ8NB25 1140 aa34.07■■■■□ 3.04
CSNK1E-205ENST00000405675 NACAP1Q9BZK3 213 aa34.07■■■■□ 3.04
CSNK1E-205ENST00000405675 GGA1Q9UJY5 639 aa34.07■■■■□ 3.04
CSNK1E-205ENST00000405675 ATP2B4P23634 1241 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 DYNLL1P63167 89 aaKnown RBP34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 NAA16Q6N069 864 aaPredicted RBP34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 SDR42E1Q8WUS8 393 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 PODXL2Q9NZ53 605 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 ZNF445P59923 1031 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 OLFM4Q6UX06 510 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 GRPEL1Q9HAV7 217 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 ISY1Q9ULR0 285 aaKnown RBP34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 JAG2Q9Y219 1238 aa34.06■■■■□ 3.04
CSNK1E-205ENST00000405675 TIAM2Q8IVF5 1701 aa34.05■■■■□ 3.04
CSNK1E-205ENST00000405675 GOLGA8BA8MQT2 603 aa34.05■■■■□ 3.04
CSNK1E-205ENST00000405675 H0YIN7 160 aa34.05■■■■□ 3.04
CSNK1E-205ENST00000405675 POLLQ9UGP5 575 aa34.05■■■■□ 3.04
CSNK1E-205ENST00000405675 SH2B2O14492 632 aaPredicted RBP34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 CHRNA5P30532 468 aa34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 HMGN5P82970 282 aaKnown RBP34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 SLC16A10Q8TF71 515 aa34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 NSUN4Q96CB9 384 aaKnown RBP34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 TBC1D16Q8TBP0 767 aa34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 SENP2Q9HC62 589 aa34.04■■■■□ 3.04
CSNK1E-205ENST00000405675 MYH13Q9UKX3 1938 aa34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 MRE11P49959 708 aa34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 MECOMQ03112 1051 aa34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 AKNAD1Q5T1N1 836 aa34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 C15orf52Q6ZUT6 534 aaKnown RBP34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 ANGEL1Q9UNK9 670 aaKnown RBP34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 FOSBP53539 338 aa34.03■■■■□ 3.04
CSNK1E-205ENST00000405675 LRRC37AA6NMS7 1700 aa34.02■■■■□ 3.04
CSNK1E-205ENST00000405675 H3BQV1 296 aa34.01■■■■□ 3.04
CSNK1E-205ENST00000405675 FDPSP14324 419 aaKnown RBP34.01■■■■□ 3.04
CSNK1E-205ENST00000405675 PRDX5P30044 214 aa34.01■■■■□ 3.04
CSNK1E-205ENST00000405675 RESTQ13127 1097 aa34.01■■■■□ 3.04
CSNK1E-205ENST00000405675 IFFO2Q5TF58 517 aa34.01■■■■□ 3.04
CSNK1E-205ENST00000405675 PANK2Q9BZ23 570 aa34.01■■■■□ 3.04
CSNK1E-205ENST00000405675 IGDCC4Q8TDY8 1250 aa34.01■■■■□ 3.03
CSNK1E-205ENST00000405675 KDM4AO75164 1064 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 TPRNQ4KMQ1 711 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 STYK1Q6J9G0 422 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 STAG1Q8WVM7 1258 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 ZSWIM5Q9P217 1185 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 C6orf229H3BNL8 230 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 MFSD6Q6ZSS7 791 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 STK11IPQ8N1F8 1099 aa34■■■■□ 3.03
CSNK1E-205ENST00000405675 SMIM22K7EJ46 135 aa33.99■■■■□ 3.03
CSNK1E-205ENST00000405675 ZNF804AQ7Z570 1209 aa33.99■■■■□ 3.03
CSNK1E-205ENST00000405675 CHD4Q14839 1912 aa33.99■■■■□ 3.03
CSNK1E-205ENST00000405675 UBE2HP62256 183 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 PPARAQ07869 468 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 TMEM87BQ96K49 555 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 ZBTB22O15209 634 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 KRT85P78386 507 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 TDRD7Q8NHU6 1098 aaKnown RBP33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 CHMP4CQ96CF2 233 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 LY9Q9HBG7 655 aa33.98■■■■□ 3.03
CSNK1E-205ENST00000405675 LTBP1Q14766 1721 aa33.97■■■■□ 3.03
CSNK1E-205ENST00000405675 UPF1Q92900 1129 aaKnown RBP eCLIP33.97■■■■□ 3.03
CSNK1E-205ENST00000405675 CNNM2Q9H8M5 875 aa33.97■■■■□ 3.03
CSNK1E-205ENST00000405675 ZBTB7AO95365 584 aa33.97■■■■□ 3.03
CSNK1E-205ENST00000405675 RRP12Q5JTH9 1297 aaKnown RBP33.97■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms