RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 CRAMP1Q96RY5 1269 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 TNS1Q9HBL0 1735 aaKnown RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 KLF18A0A0U1RQI7 1052 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 DHX16O60231 1041 aaKnown RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 ATP2B4P23634 1241 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 ZNF445P59923 1031 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 CCT2P78371 535 aaKnown RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 CHAF1AQ13111 956 aaPredicted RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 AKNAD1Q5T1N1 836 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 CDC37L1Q7L3B6 337 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 TMC4Q7Z404 712 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 ZNF804AQ7Z570 1209 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 USP48Q86UV5 1035 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 TXNRD3Q86VQ6 643 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 COL23A1Q86Y22 540 aaPredicted RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 NSUN4Q96CB9 384 aaKnown RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 TMEM87BQ96K49 555 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 KRT23Q9C075 422 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 NRXN2Q9P2S2 1712 aa13.9□□□□□ -0.18
SMS-202ENST00000404933 ANGEL1Q9UNK9 670 aaKnown RBP13.9□□□□□ -0.18
SMS-202ENST00000404933 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 PTPDC1A2A3K4 754 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 MECOMQ03112 1051 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 CAVIN1Q6NZI2 390 aaKnown RBP13.89□□□□□ -0.19
SMS-202ENST00000404933 MFSD6Q6ZSS7 791 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 WDR66Q8TBY9 1149 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 STAG1Q8WVM7 1258 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 DDX11Q96FC9 970 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 RNF41Q9H4P4 317 aaPredicted RBP13.89□□□□□ -0.19
SMS-202ENST00000404933 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
SMS-202ENST00000404933 CNPY2Q9Y2B0 182 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 ANKRD31Q8N7Z5 1873 aa13.89□□□□□ -0.19
SMS-202ENST00000404933 NEDD4P46934 1319 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 SALL1Q9NSC2 1324 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 GOLGA8BA8MQT2 603 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 B4E1Z4 1266 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 H3BQV1 296 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 CTDNEP1O95476 244 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 GPSM2P81274 684 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 CTDSPL2Q05D32 466 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 IFFO2Q5TF58 517 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 BRIP1Q9BX63 1249 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 NCOA5Q9HCD5 579 aaKnown RBP13.88□□□□□ -0.19
SMS-202ENST00000404933 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
SMS-202ENST00000404933 SH2B2O14492 632 aaPredicted RBP13.87□□□□□ -0.19
SMS-202ENST00000404933 GIMAP6Q6P9H5 292 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 TDRD7Q8NHU6 1098 aaKnown RBP13.87□□□□□ -0.19
SMS-202ENST00000404933 ZNF384Q8TF68 577 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 GDPD2Q9HCC8 539 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 ANAPC4Q9UJX5 808 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 NSFL1CQ9UNZ2 370 aaKnown RBP13.87□□□□□ -0.19
SMS-202ENST00000404933 LRRC37AA6NMS7 1700 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 UFL1O94874 794 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 DNM1Q05193 864 aaKnown RBP13.87□□□□□ -0.19
SMS-202ENST00000404933 HSP90AA2PQ14568 343 aaPredicted RBP13.87□□□□□ -0.19
SMS-202ENST00000404933 MTA3Q9BTC8 594 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 PODXL2Q9NZ53 605 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 DUOX1Q9NRD9 1551 aa13.87□□□□□ -0.19
SMS-202ENST00000404933 PRDX5P30044 214 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 LIFRP42702 1097 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 DYNLL1P63167 89 aaKnown RBP13.86□□□□□ -0.19
SMS-202ENST00000404933 KRT85P78386 507 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 PPARAQ07869 468 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 ZSCAN30Q86W11 494 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 GAS2L3Q86XJ1 694 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 DZIP1Q86YF9 867 aaKnown RBP13.86□□□□□ -0.19
SMS-202ENST00000404933 SDR42E1Q8WUS8 393 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 ZSCAN16Q9H4T2 348 aaPredicted RBP13.86□□□□□ -0.19
SMS-202ENST00000404933 HPS5Q9UPZ3 1129 aa13.86□□□□□ -0.19
SMS-202ENST00000404933 BAZ2AQ9UIF9 1905 aaKnown RBP13.86□□□□□ -0.19
SMS-202ENST00000404933 CPLX1O14810 134 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 FIBPO43427 364 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 KDM4AO75164 1064 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 UBE2HP62256 183 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 SART3Q15020 963 aaKnown RBP13.85□□□□□ -0.19
SMS-202ENST00000404933 ZSCAN23Q3MJ62 389 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 TMEM67Q5HYA8 995 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 FERMT3Q86UX7 667 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 SGMS1Q86VZ5 419 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 IGDCC4Q8TDY8 1250 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 SYAP1Q96A49 352 aaPredicted RBP13.85□□□□□ -0.19
SMS-202ENST00000404933 CRNKL1Q9BZJ0 848 aaKnown RBP13.85□□□□□ -0.19
SMS-202ENST00000404933 ZSWIM5Q9P217 1185 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 PARP3Q9Y6F1 533 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 MINDY4BA8MYZ0 360 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
SMS-202ENST00000404933 LDHBP07195 334 aaKnown RBP13.85□□□□□ -0.19
SMS-202ENST00000404933 NASPP49321 788 aaPredicted RBP13.85□□□□□ -0.19
SMS-202ENST00000404933 GSTO1P78417 241 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 SLC51AQ86UW1 340 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 SP8Q8IXZ3 490 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 LY9Q9HBG7 655 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 INCENPQ9NQS7 918 aa13.85□□□□□ -0.19
SMS-202ENST00000404933 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
SMS-202ENST00000404933 MYH15Q9Y2K3 1946 aa13.84□□□□□ -0.19
SMS-202ENST00000404933 PPEF1O14829 653 aaPredicted RBP13.84□□□□□ -0.19
SMS-202ENST00000404933 GADD45BO75293 160 aaPredicted RBP13.84□□□□□ -0.19
SMS-202ENST00000404933 PCP11498 1178 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms