RNA–Protein interactions for RNA: ENST00000402876.3

PARVB-202, Transcript of parvin beta, humanhuman

TSL 1 (best)

Gene PARVB, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-202ENST00000402876 RASSF7Q02833 373 aa23.16■■□□□ 1.3
PARVB-202ENST00000402876 IMMTQ16891 758 aaKnown RBP23.16■■□□□ 1.3
PARVB-202ENST00000402876 TSGA10IPQ3SY00 556 aa23.16■■□□□ 1.3
PARVB-202ENST00000402876 MXD3Q9BW11 206 aa23.16■■□□□ 1.3
PARVB-202ENST00000402876 NAPBQ9H115 298 aa23.16■■□□□ 1.3
PARVB-202ENST00000402876 LAMB1P07942 1786 aa23.16■■□□□ 1.3
PARVB-202ENST00000402876 ADAMTSL1Q8N6G6 1762 aa23.16■■□□□ 1.3
PARVB-202ENST00000402876 BAZ2AQ9UIF9 1905 aaKnown RBP23.16■■□□□ 1.3
PARVB-202ENST00000402876 GSG1L2A8MUP6 293 aa23.15■■□□□ 1.3
PARVB-202ENST00000402876 F8W031 263 aaPredicted RBP23.15■■□□□ 1.3
PARVB-202ENST00000402876 BECN1Q14457 450 aa23.15■■□□□ 1.3
PARVB-202ENST00000402876 IFNL3Q8IZI9 196 aa23.15■■□□□ 1.3
PARVB-202ENST00000402876 SBF1O95248 1867 aa23.15■■□□□ 1.3
PARVB-202ENST00000402876 GPR75-ASB3A0A0A6YYF3 556 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 CYP21A2P08686 494 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 PSMA5P28066 241 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 BTDP43251 543 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 TDO2P48775 406 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 HDLBPQ00341 1268 aaKnown RBP23.14■■□□□ 1.29
PARVB-202ENST00000402876 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 RSBN1LQ6PCB5 846 aaPredicted RBP23.14■■□□□ 1.29
PARVB-202ENST00000402876 HHIPL2Q6UWX4 724 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 TEKT1Q969V4 418 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 MRIQ9BWK5 157 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 TM6SF1Q9BZW5 370 aa23.14■■□□□ 1.29
PARVB-202ENST00000402876 EPB41L4AQ9HCS5 686 aaPredicted RBP23.14■■□□□ 1.29
PARVB-202ENST00000402876 PRKAB2O43741 272 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 ST18O60284 1047 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 RAD17O75943 681 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 VIL1P09327 827 aaKnown RBP23.13■■□□□ 1.29
PARVB-202ENST00000402876 ARHGAP27Q6ZUM4 889 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 IPO9Q96P70 1041 aaKnown RBP23.13■■□□□ 1.29
PARVB-202ENST00000402876 ATP8A2Q9NTI2 1148 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 DAGLAQ9Y4D2 1042 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 TIAM2Q8IVF5 1701 aa23.13■■□□□ 1.29
PARVB-202ENST00000402876 PSMD14O00487 310 aa23.12■■□□□ 1.29
PARVB-202ENST00000402876 ZNF213O14771 459 aa23.12■■□□□ 1.29
PARVB-202ENST00000402876 KIAA0825Q8IV33 1275 aa23.12■■□□□ 1.29
PARVB-202ENST00000402876 SDR42E1Q8WUS8 393 aa23.12■■□□□ 1.29
PARVB-202ENST00000402876 JAKMIP1Q96N16 626 aaKnown RBP23.12■■□□□ 1.29
PARVB-202ENST00000402876 SCNN1DP51172 638 aa23.11■■□□□ 1.29
PARVB-202ENST00000402876 TNIP1Q15025 636 aa23.11■■□□□ 1.29
PARVB-202ENST00000402876 CIAPIN1Q6FI81 312 aa23.11■■□□□ 1.29
PARVB-202ENST00000402876 SH3RF3Q8TEJ3 882 aaPredicted RBP23.11■■□□□ 1.29
PARVB-202ENST00000402876 SNX21Q969T3 373 aa23.11■■□□□ 1.29
PARVB-202ENST00000402876 CASTP20810 708 aaKnown RBP23.1■■□□□ 1.29
PARVB-202ENST00000402876 CRKP46108 304 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 NEK4P51957 841 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 HSCBQ8IWL3 235 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 AGBL3Q8NEM8 1001 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 SERPINA10Q9UK55 444 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 CYP46A1Q9Y6A2 500 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 MYH1P12882 1939 aa23.1■■□□□ 1.29
PARVB-202ENST00000402876 DDX60LQ5H9U9 1706 aaKnown RBP23.09■■□□□ 1.29
PARVB-202ENST00000402876 USP5P45974 858 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 HAND2P61296 217 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 CXCL9Q07325 125 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 ADCK5Q3MIX3 580 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 TEX11Q8IYF3 940 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 ZDHHC15Q96MV8 337 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 ZSWIM6Q9HCJ5 1215 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 DAXXQ9UER7 740 aaPredicted RBP23.09■■□□□ 1.29
PARVB-202ENST00000402876 HDAC9Q9UKV0 1011 aa23.09■■□□□ 1.29
PARVB-202ENST00000402876 E7EWF7 191 aa23.08■■□□□ 1.29
PARVB-202ENST00000402876 HMGB1P09429 215 aaKnown RBP23.08■■□□□ 1.29
PARVB-202ENST00000402876 LMNB1P20700 586 aa23.08■■□□□ 1.29
PARVB-202ENST00000402876 EIF6P56537 245 aaKnown RBP23.08■■□□□ 1.29
PARVB-202ENST00000402876 BLOC1S2Q6QNY1 142 aa23.08■■□□□ 1.29
PARVB-202ENST00000402876 GMLQ99445 158 aa23.08■■□□□ 1.29
PARVB-202ENST00000402876 UPF3BQ9BZI7 483 aaKnown RBP23.08■■□□□ 1.29
PARVB-202ENST00000402876 TAF6LQ9Y6J9 622 aa23.08■■□□□ 1.29
PARVB-202ENST00000402876 RUFY3Q7L099 469 aa23.07■■□□□ 1.28
PARVB-202ENST00000402876 NEK1Q96PY6 1258 aa23.07■■□□□ 1.28
PARVB-202ENST00000402876 DCP1AQ9NPI6 582 aaPredicted RBP23.07■■□□□ 1.28
PARVB-202ENST00000402876 ARPP21Q9UBL0 812 aaPredicted RBP23.07■■□□□ 1.28
PARVB-202ENST00000402876 FZD9O00144 591 aa23.06■■□□□ 1.28
PARVB-202ENST00000402876 MMP14P50281 582 aa23.06■■□□□ 1.28
PARVB-202ENST00000402876 PRELPP51888 382 aa23.06■■□□□ 1.28
PARVB-202ENST00000402876 RBM5P52756 815 aaKnown RBP eCLIP23.06■■□□□ 1.28
PARVB-202ENST00000402876 RHBDL3P58872 404 aa23.06■■□□□ 1.28
PARVB-202ENST00000402876 AMOTL1Q8IY63 956 aa23.06■■□□□ 1.28
PARVB-202ENST00000402876 OGFOD1Q8N543 542 aa23.06■■□□□ 1.28
PARVB-202ENST00000402876 YBX3P16989 372 aaKnown RBP eCLIP23.05■■□□□ 1.28
PARVB-202ENST00000402876 RPS12P25398 132 aaKnown RBP23.05■■□□□ 1.28
PARVB-202ENST00000402876 MCM2P49736 904 aa23.05■■□□□ 1.28
PARVB-202ENST00000402876 SBK1Q52WX2 424 aa23.05■■□□□ 1.28
PARVB-202ENST00000402876 STOX1Q6ZVD7 989 aa23.05■■□□□ 1.28
PARVB-202ENST00000402876 TGFBRAP1Q8WUH2 860 aa23.05■■□□□ 1.28
PARVB-202ENST00000402876 TBC1D2Q9BYX2 928 aa23.05■■□□□ 1.28
PARVB-202ENST00000402876 ANAPC4Q9UJX5 808 aa23.05■■□□□ 1.28
PARVB-202ENST00000402876 RPS6KB1P23443 525 aa23.04■■□□□ 1.28
PARVB-202ENST00000402876 PPARAQ07869 468 aa23.04■■□□□ 1.28
PARVB-202ENST00000402876 TRDNQ13061 729 aa23.04■■□□□ 1.28
PARVB-202ENST00000402876 APOBEC3HQ6NTF7 200 aaKnown RBP23.04■■□□□ 1.28
PARVB-202ENST00000402876 RALYLQ86SE5 291 aaKnown RBP23.04■■□□□ 1.28
PARVB-202ENST00000402876 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
PARVB-202ENST00000402876 MINDY4BA8MYZ0 360 aa23.03■■□□□ 1.28
PARVB-202ENST00000402876 USP17L8P0C7I0 530 aa23.03■■□□□ 1.28
PARVB-202ENST00000402876 CFAP100Q494V2 611 aa23.03■■□□□ 1.28
PARVB-202ENST00000402876 CTR9Q6PD62 1173 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms