RNA–Protein interactions for RNA: ENST00000402314.6

ATG3-202, Transcript of autophagy related 3, humanhuman

TSL 1 (best) BASIC

Gene ATG3, Length 3,010 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-202ENST00000402314 C8orf76Q96K31 380 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 SEC31BQ9NQW1 1179 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 ZNF532Q9HCE3 1301 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 CPLX1O14810 134 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 E4F1Q66K89 784 aaPredicted RBP16.32■□□□□ 0.2
ATG3-202ENST00000402314 CCDC102BQ68D86 513 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 CCDC73Q6ZRK6 1079 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 DZIP3Q86Y13 1208 aaKnown RBP16.32■□□□□ 0.2
ATG3-202ENST00000402314 DHX40Q8IX18 779 aaKnown RBP16.32■□□□□ 0.2
ATG3-202ENST00000402314 IFNKQ9P0W0 207 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 B4E1Z4 1266 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 PHKBQ93100 1093 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 IQSEC3Q9UPP2 1182 aaPredicted RBP16.32■□□□□ 0.2
ATG3-202ENST00000402314 FHOD1Q9Y613 1164 aa16.32■□□□□ 0.2
ATG3-202ENST00000402314 KINO60870 393 aaKnown RBP16.31■□□□□ 0.2
ATG3-202ENST00000402314 ADD2P35612 726 aa16.31■□□□□ 0.2
ATG3-202ENST00000402314 GNL2Q13823 731 aaKnown RBP16.31■□□□□ 0.2
ATG3-202ENST00000402314 NCOA7Q8NI08 942 aa16.31■□□□□ 0.2
ATG3-202ENST00000402314 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.31■□□□□ 0.2
ATG3-202ENST00000402314 PLA2G12BQ9BX93 195 aa16.31■□□□□ 0.2
ATG3-202ENST00000402314 URI1O94763 535 aaPredicted RBP16.31■□□□□ 0.2
ATG3-202ENST00000402314 ZFYP08048 801 aaPredicted RBP16.31■□□□□ 0.2
ATG3-202ENST00000402314 PNMA6AP0CW24 399 aaPredicted RBP16.31■□□□□ 0.2
ATG3-202ENST00000402314 STX1AQ16623 288 aa16.31■□□□□ 0.2
ATG3-202ENST00000402314 XPO4Q9C0E2 1151 aaKnown RBP16.31■□□□□ 0.2
ATG3-202ENST00000402314 PDE8BO95263 885 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 PLA2G4AP47712 749 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 BMS1Q14692 1282 aaKnown RBP16.3■□□□□ 0.2
ATG3-202ENST00000402314 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 VGLL2Q8N8G2 317 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 TEX13AQ9BXU3 409 aaPredicted RBP16.3■□□□□ 0.2
ATG3-202ENST00000402314 CALCOCO1Q9P1Z2 691 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 SHANK3Q9BYB0 1731 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 WTIPA6NIX2 430 aaPredicted RBP16.3■□□□□ 0.2
ATG3-202ENST00000402314 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
ATG3-202ENST00000402314 NDUFA8P51970 172 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
ATG3-202ENST00000402314 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 PPP1R13BQ96KQ4 1090 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 ZNF396Q96N95 335 aaPredicted RBP16.3■□□□□ 0.2
ATG3-202ENST00000402314 ZSWIM4Q9H7M6 989 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 PLEKHG2Q9H7P9 1386 aa16.3■□□□□ 0.2
ATG3-202ENST00000402314 PDE6AP16499 860 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 LMOD1P29536 600 aaPredicted RBP16.29■□□□□ 0.2
ATG3-202ENST00000402314 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 STK38Q15208 465 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 DPCR1Q3MIW9 517 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 ARMCX5Q6P1M9 558 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 NWD2Q9ULI1 1742 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 PRKAB2O43741 272 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 ZRSR1Q15695 479 aaKnown RBP16.29■□□□□ 0.2
ATG3-202ENST00000402314 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 FBXO18Q8NFZ0 1043 aa16.29■□□□□ 0.2
ATG3-202ENST00000402314 CDC27P30260 824 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 FAM160A1Q05DH4 1040 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 LRRFIP1Q32MZ4 808 aaKnown RBP16.28■□□□□ 0.2
ATG3-202ENST00000402314 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 CCDC82Q8N4S0 544 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 UBXN4Q92575 508 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 MRFAP1L1Q96HT8 127 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 CARD6Q9BX69 1037 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.28■□□□□ 0.2
ATG3-202ENST00000402314 NEDD4P46934 1319 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 EXOC5O00471 708 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 ADAMTS2O95450 1211 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 SUSD4Q5VX71 490 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 ARMT1Q9H993 441 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 TACC3Q9Y6A5 838 aa16.28■□□□□ 0.2
ATG3-202ENST00000402314 SMIM22K7EJ46 135 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 MAGEB6Q8N7X4 407 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 MNS1Q8NEH6 495 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 ZKSCAN3Q9BRR0 538 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 TRIM66O15016 1216 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 PDE8AO60658 829 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 CYP2C19P33261 490 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 TNNT3P45378 269 aaPredicted RBP16.27■□□□□ 0.2
ATG3-202ENST00000402314 EVCP57679 992 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 TRDNQ13061 729 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 RASGRF1Q13972 1273 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 RRP12Q5JTH9 1297 aaKnown RBP16.27■□□□□ 0.2
ATG3-202ENST00000402314 KRBA2Q6ZNG9 492 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 C10orf67Q8IYJ2 551 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 CEP57L1Q8IYX8 460 aa16.27■□□□□ 0.2
ATG3-202ENST00000402314 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.27■□□□□ 0.22e-7■■□□□ 13.2
ATG3-202ENST00000402314 SFPQP23246 707 aaKnown RBP eCLIP16.27■□□□□ 0.19
ATG3-202ENST00000402314 KCNQ4P56696 695 aa16.27■□□□□ 0.19
ATG3-202ENST00000402314 SKIDA1Q1XH10 827 aa16.27■□□□□ 0.19
ATG3-202ENST00000402314 MYSM1Q5VVJ2 828 aa16.27■□□□□ 0.19
ATG3-202ENST00000402314 TMCO3Q6UWJ1 677 aa16.27■□□□□ 0.19
ATG3-202ENST00000402314 SMARCE1Q969G3 411 aa16.27■□□□□ 0.19
ATG3-202ENST00000402314 FBXO3Q9UK99 471 aa16.27■□□□□ 0.19
ATG3-202ENST00000402314 MYO5AQ9Y4I1 1855 aaKnown RBP16.26■□□□□ 0.19
ATG3-202ENST00000402314 ATP1A3P13637 1013 aa16.26■□□□□ 0.19
ATG3-202ENST00000402314 BCAMP50895 628 aa16.26■□□□□ 0.19
ATG3-202ENST00000402314 FMR1NBQ8N0W7 255 aaPredicted RBP16.26■□□□□ 0.19
ATG3-202ENST00000402314 CMTR1Q8N1G2 835 aaKnown RBP16.26■□□□□ 0.19
ATG3-202ENST00000402314 MIGA1Q8NAN2 632 aa16.26■□□□□ 0.19
ATG3-202ENST00000402314 MRPS27Q92552 414 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms