RNA–Protein interactions for RNA: ENST00000402096.5

ATG4B-204, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2 BASIC

Gene ATG4B, Length 1,685 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-204ENST00000402096 STRIP1Q5VSL9 837 aa24.38■■□□□ 1.49
ATG4B-204ENST00000402096 BLOC1S2Q6QNY1 142 aa24.38■■□□□ 1.49
ATG4B-204ENST00000402096 USP17L1Q7RTZ2 530 aa24.38■■□□□ 1.49
ATG4B-204ENST00000402096 CRNKL1Q9BZJ0 848 aaKnown RBP24.38■■□□□ 1.49
ATG4B-204ENST00000402096 TAOK3Q9H2K8 898 aa24.38■■□□□ 1.49
ATG4B-204ENST00000402096 K7ELQ4 463 aaPredicted RBP24.37■■□□□ 1.49
ATG4B-204ENST00000402096 ALX1Q15699 326 aa24.37■■□□□ 1.49
ATG4B-204ENST00000402096 VPS33BQ9H267 617 aa24.37■■□□□ 1.49
ATG4B-204ENST00000402096 ZSWIM6Q9HCJ5 1215 aa24.37■■□□□ 1.49
ATG4B-204ENST00000402096 TTF2Q9UNY4 1162 aaKnown RBP24.37■■□□□ 1.49
ATG4B-204ENST00000402096 ZMYM6O95789 1325 aa24.37■■□□□ 1.49
ATG4B-204ENST00000402096 IARSP41252 1262 aaKnown RBP24.37■■□□□ 1.49
ATG4B-204ENST00000402096 NOL8Q76FK4 1167 aaKnown RBP24.37■■□□□ 1.49
ATG4B-204ENST00000402096 RUFY3Q7L099 469 aa24.37■■□□□ 1.49
ATG4B-204ENST00000402096 NEK1Q96PY6 1258 aa24.37■■□□□ 1.49
ATG4B-204ENST00000402096 FHDC1Q9C0D6 1143 aaPredicted RBP24.37■■□□□ 1.49
ATG4B-204ENST00000402096 E7EWF7 191 aa24.36■■□□□ 1.49
ATG4B-204ENST00000402096 STOX1Q6ZVD7 989 aa24.36■■□□□ 1.49
ATG4B-204ENST00000402096 PDRG1Q9NUG6 133 aa24.36■■□□□ 1.49
ATG4B-204ENST00000402096 CDK5RAP2Q96SN8 1893 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 YDJCA8MPS7 323 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 BTDP43251 543 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 DACT2Q5SW24 774 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 NIM1KQ8IY84 436 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 SPRYD3Q8NCJ5 442 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 IL27Q8NEV9 243 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 ADAMTSL1Q8N6G6 1762 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 COL4A5P29400 1685 aa24.35■■□□□ 1.49
ATG4B-204ENST00000402096 MCM2P49736 904 aa24.34■■□□□ 1.49
ATG4B-204ENST00000402096 SCNN1DP51172 638 aa24.34■■□□□ 1.49
ATG4B-204ENST00000402096 FKBP1AP62942 108 aaKnown RBP24.34■■□□□ 1.49
ATG4B-204ENST00000402096 SH3RF3Q8TEJ3 882 aaPredicted RBP24.34■■□□□ 1.49
ATG4B-204ENST00000402096 NFKBIEO00221 500 aa24.33■■□□□ 1.49
ATG4B-204ENST00000402096 RPS6KB1P23443 525 aa24.33■■□□□ 1.49
ATG4B-204ENST00000402096 KIAA0825Q8IV33 1275 aa24.33■■□□□ 1.49
ATG4B-204ENST00000402096 NAV1Q8NEY1 1877 aa24.33■■□□□ 1.49
ATG4B-204ENST00000402096 LAMB1P07942 1786 aa24.33■■□□□ 1.48
ATG4B-204ENST00000402096 GPR75-ASB3A0A0A6YYF3 556 aa24.32■■□□□ 1.48
ATG4B-204ENST00000402096 HSP90AA1P07900 732 aaKnown RBP24.32■■□□□ 1.48
ATG4B-204ENST00000402096 USP5P45974 858 aa24.32■■□□□ 1.48
ATG4B-204ENST00000402096 PPP4CP60510 307 aa24.32■■□□□ 1.48
ATG4B-204ENST00000402096 CERS3Q8IU89 383 aa24.32■■□□□ 1.48
ATG4B-204ENST00000402096 TTC14Q96N46 770 aa24.32■■□□□ 1.48
ATG4B-204ENST00000402096 GAKO14976 1311 aa24.32■■□□□ 1.48
ATG4B-204ENST00000402096 MINDY4BA8MYZ0 360 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 HMGB1P09429 215 aaKnown RBP24.31■■□□□ 1.48
ATG4B-204ENST00000402096 AK2P54819 239 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 JDP2Q8WYK2 163 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 FAM163AQ96GL9 167 aaPredicted RBP24.31■■□□□ 1.48
ATG4B-204ENST00000402096 TCEANC2Q96MN5 208 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 ATP8A2Q9NTI2 1148 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 ZNRF3Q9ULT6 936 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 DAGLAQ9Y4D2 1042 aa24.31■■□□□ 1.48
ATG4B-204ENST00000402096 RAD17O75943 681 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 PLCG2P16885 1265 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 CTDSPL2Q05D32 466 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 COL9A3Q14050 684 aaPredicted RBP24.3■■□□□ 1.48
ATG4B-204ENST00000402096 TBC1D10CQ8IV04 446 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 TIAM2Q8IVF5 1701 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 RASSF7Q02833 373 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 GIMAP6Q6P9H5 292 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 RALYLQ86SE5 291 aaKnown RBP24.3■■□□□ 1.48
ATG4B-204ENST00000402096 TEKT1Q969V4 418 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 NBPF3Q9H094 633 aa24.3■■□□□ 1.48
ATG4B-204ENST00000402096 PPARAQ07869 468 aa24.29■■□□□ 1.48
ATG4B-204ENST00000402096 TRDNQ13061 729 aa24.29■■□□□ 1.48
ATG4B-204ENST00000402096 TEX11Q8IYF3 940 aa24.29■■□□□ 1.48
ATG4B-204ENST00000402096 NCOA7Q8NI08 942 aa24.29■■□□□ 1.48
ATG4B-204ENST00000402096 DCP1AQ9NPI6 582 aaPredicted RBP24.29■■□□□ 1.48
ATG4B-204ENST00000402096 STK11IPQ8N1F8 1099 aa24.28■■□□□ 1.48
ATG4B-204ENST00000402096 TGFBRAP1Q8WUH2 860 aa24.28■■□□□ 1.48
ATG4B-204ENST00000402096 LARP6Q9BRS8 491 aaKnown RBP24.28■■□□□ 1.48
ATG4B-204ENST00000402096 FOCADQ5VW36 1801 aa24.28■■□□□ 1.48
ATG4B-204ENST00000402096 ECM29Q5VYK3 1845 aa24.28■■□□□ 1.48
ATG4B-204ENST00000402096 PSMD14O00487 310 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 CRKP46108 304 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 RBM5P52756 815 aaKnown RBP eCLIP24.27■■□□□ 1.482e-12■■■□□ 18.6
ATG4B-204ENST00000402096 FGD1P98174 961 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 HHIPL2Q6UWX4 724 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 DHX32Q7L7V1 743 aaKnown RBP24.27■■□□□ 1.48
ATG4B-204ENST00000402096 FOXD4L1Q9NU39 408 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 LTBP3Q9NS15 1303 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 RSBN1LQ6PCB5 846 aaPredicted RBP24.27■■□□□ 1.48
ATG4B-204ENST00000402096 TMX3Q96JJ7 454 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 SYT17Q9BSW7 474 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 MCM9Q9NXL9 1143 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 MYO3BQ8WXR4 1341 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 MYH1P12882 1939 aa24.27■■□□□ 1.48
ATG4B-204ENST00000402096 CYP2D7A0A087X1C5 515 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 USP17L12C9JPN9 530 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 USP17L21D6R901 530 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 ANKRD1Q15327 319 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 CTR9Q6PD62 1173 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 MAPKAPK5Q8IW41 473 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 SLKQ9H2G2 1235 aaPredicted RBP24.26■■□□□ 1.47
ATG4B-204ENST00000402096 TOMM22Q9NS69 142 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 ARPP21Q9UBL0 812 aaPredicted RBP24.26■■□□□ 1.47
ATG4B-204ENST00000402096 LIMCH1Q9UPQ0 1083 aa24.26■■□□□ 1.47
ATG4B-204ENST00000402096 RHBDL3P58872 404 aa24.25■■□□□ 1.47
ATG4B-204ENST00000402096 AKNAD1Q5T1N1 836 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms