RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 B4E1Z4 1266 aa18.83■□□□□ 0.61
TSC2-204ENST00000401874 GSPT1P15170 499 aaKnown RBP18.83■□□□□ 0.61
TSC2-204ENST00000401874 CCDC121Q6ZUS5 278 aa18.83■□□□□ 0.61
TSC2-204ENST00000401874 FERMT1Q9BQL6 677 aa18.83■□□□□ 0.61
TSC2-204ENST00000401874 ANKRD2Q9GZV1 360 aa18.83■□□□□ 0.61
TSC2-204ENST00000401874 ARID5AQ03989 594 aa18.83■□□□□ 0.61
TSC2-204ENST00000401874 HELBQ8NG08 1087 aaPredicted RBP18.83■□□□□ 0.61
TSC2-204ENST00000401874 PPP1R9BQ96SB3 815 aa18.83■□□□□ 0.61
TSC2-204ENST00000401874 ATP2C2O75185 946 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 GTF3C6Q969F1 213 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 TIMM10P62072 90 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 ZNF174Q15697 407 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 NGLY1Q96IV0 654 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 GPATCH11Q8N954 259 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 SUCLG2Q96I99 432 aa18.83■□□□□ 0.6
TSC2-204ENST00000401874 NCOA5Q9HCD5 579 aaKnown RBP18.83■□□□□ 0.6
TSC2-204ENST00000401874 ZNF202O95125 648 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 TNNI2P48788 182 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 MSL1Q68DK7 614 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 GABPB1Q06547 395 aaPredicted RBP18.82■□□□□ 0.6
TSC2-204ENST00000401874 MICALL1Q8N3F8 863 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 ARHGAP6O43182 974 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 U2AF2P26368 475 aaKnown RBP eCLIP18.82■□□□□ 0.6
TSC2-204ENST00000401874 CCT6AP40227 531 aaKnown RBP18.82■□□□□ 0.6
TSC2-204ENST00000401874 GTF2A1P52655 376 aaPredicted RBP18.82■□□□□ 0.6
TSC2-204ENST00000401874 SV2BQ7L1I2 683 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 DENND2AQ9ULE3 1009 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 SYNRGQ9UMZ2 1314 aa18.82■□□□□ 0.6
TSC2-204ENST00000401874 TRMT2AQ8IZ69 625 aaKnown RBP18.81■□□□□ 0.6
TSC2-204ENST00000401874 OTUD6BQ8N6M0 293 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 TBX22Q9Y458 520 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 FAM13AO94988 1023 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 CFAP58Q5T655 872 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 HS2ST1Q7LGA3 356 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 XAGE2Q96GT9 111 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 SPDYE3A6NKU9 549 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 PHACTR2O75167 634 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 CHMP4BP1P59074 171 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 IPO4Q8TEX9 1081 aaKnown RBP18.81■□□□□ 0.6
TSC2-204ENST00000401874 ZKSCAN3Q9BRR0 538 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 MRVI1Q9Y6F6 885 aa18.81■□□□□ 0.6
TSC2-204ENST00000401874 ZNF500O60304 480 aaPredicted RBP18.81■□□□□ 0.6
TSC2-204ENST00000401874 PUM3Q15397 648 aaKnown RBP18.8■□□□□ 0.6
TSC2-204ENST00000401874 TRMT1LQ7Z2T5 733 aaKnown RBP18.8■□□□□ 0.6
TSC2-204ENST00000401874 NOC4LQ9BVI4 516 aaKnown RBP18.8■□□□□ 0.6
TSC2-204ENST00000401874 GPAA1O43292 621 aa18.8■□□□□ 0.6
TSC2-204ENST00000401874 PPP2R5BQ15173 497 aa18.8■□□□□ 0.6
TSC2-204ENST00000401874 IFT81Q8WYA0 676 aa18.8■□□□□ 0.6
TSC2-204ENST00000401874 DSCC1Q9BVC3 393 aa18.8■□□□□ 0.6
TSC2-204ENST00000401874 DIS3L2Q8IYB7 885 aaKnown RBP18.8■□□□□ 0.6
TSC2-204ENST00000401874 ATP2A1O14983 1001 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 PICALMQ13492 652 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 TTC31Q49AM3 519 aaPredicted RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 C17orf53Q8N3J3 647 aaPredicted RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 RPL13P26373 211 aaKnown RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 TBC1D8BQ0IIM8 1120 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 CCDC65Q8IXS2 484 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 MTRF1LQ9UGC7 380 aaKnown RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 PARP1P09874 1014 aaKnown RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 NUP58Q9BVL2 599 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 LDHBP07195 334 aaKnown RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 VWA3BQ502W6 1294 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 CNNM4Q6P4Q7 775 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 TMTC1Q8IUR5 882 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 KLHDC4Q8TBB5 520 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 FBF1Q8TES7 1133 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 CARD6Q9BX69 1037 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 POLR2DO15514 142 aaKnown RBP18.79■□□□□ 0.6
TSC2-204ENST00000401874 ITGA6P23229 1130 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 ELF2Q15723 593 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 SSH3Q8TE77 659 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 SELENOSQ9BQE4 189 aa18.79■□□□□ 0.6
TSC2-204ENST00000401874 ATP5JP18859 108 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 PPP1R14CQ8TAE6 165 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 VPS16Q9H269 839 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 PAK1Q13153 545 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 GCKRQ14397 625 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 TPTE2Q6XPS3 522 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 IQCGQ9H095 443 aaKnown RBP18.78■□□□□ 0.6
TSC2-204ENST00000401874 ME3Q16798 604 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 AFAP1L1Q8TED9 768 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 ZNF219Q9P2Y4 722 aaPredicted RBP18.78■□□□□ 0.6
TSC2-204ENST00000401874 PLIN2Q99541 437 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 C19orf44Q9H6X5 657 aa18.78■□□□□ 0.6
TSC2-204ENST00000401874 ARHGEF5Q12774 1597 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 TSNARE1Q96NA8 513 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 RGS12O14924 1447 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 FAM135BQ49AJ0 1406 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 PDE4DQ08499 809 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 ZEB2O60315 1214 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 KRT40Q6A162 431 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 MPHOSPH6Q99547 160 aaKnown RBP18.77■□□□□ 0.6
TSC2-204ENST00000401874 KDM5CP41229 1560 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 ABCA5Q8WWZ7 1642 aa18.77■□□□□ 0.6
TSC2-204ENST00000401874 EIF4G3O43432 1585 aaKnown RBP18.77■□□□□ 0.59
TSC2-204ENST00000401874 IGSF3O75054 1194 aa18.77■□□□□ 0.59
TSC2-204ENST00000401874 CPLX4Q7Z7G2 160 aa18.77■□□□□ 0.59
TSC2-204ENST00000401874 JAK2O60674 1132 aa18.76■□□□□ 0.59
TSC2-204ENST00000401874 WDHD1O75717 1129 aaPredicted RBP18.76■□□□□ 0.59
TSC2-204ENST00000401874 EIF4A1P60842 406 aaKnown RBP18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms