RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 ADGRB3O60242 1522 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 N4BP3O15049 544 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 JAK2O60674 1132 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 CORO7P57737 925 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 COL3A1P02461 1466 aaPredicted RBP15.56■□□□□ 0.08
RUNX3-203ENST00000399916 KCNA6P17658 529 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 STK38LQ9Y2H1 464 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
RUNX3-203ENST00000399916 MAP3K19Q56UN5 1328 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 TTC21BQ7Z4L5 1316 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 RNASE9P60153 205 aaKnown RBP15.55■□□□□ 0.08
RUNX3-203ENST00000399916 ME3Q16798 604 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 THOC1Q96FV9 657 aaKnown RBP15.55■□□□□ 0.08
RUNX3-203ENST00000399916 MROH2AA6NES4 1674 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 SETBP1Q9Y6X0 1596 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 SUDS3Q9H7L9 328 aaPredicted RBP15.55■□□□□ 0.08
RUNX3-203ENST00000399916 IMPACTQ9P2X3 320 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 TLDC2A0PJX2 215 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
RUNX3-203ENST00000399916 CCDC160A6NGH7 325 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 MYBL1P10243 752 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 NAPGQ99747 312 aaPredicted RBP15.55■□□□□ 0.08
RUNX3-203ENST00000399916 ECHDC1Q9NTX5 307 aa15.55■□□□□ 0.08
RUNX3-203ENST00000399916 PPRC1Q5VV67 1664 aaKnown RBP15.55■□□□□ 0.08
RUNX3-203ENST00000399916 CEP89Q96ST8 783 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 NRXN1Q9ULB1 1477 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 CCDC6Q16204 474 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 OTUD7BQ6GQQ9 843 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 FAM167BQ9BTA0 163 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 FTOQ9C0B1 505 aaKnown RBP eCLIP15.54■□□□□ 0.08
RUNX3-203ENST00000399916 MED4Q9NPJ6 270 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 POLE2P56282 527 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 MXRA7P84157 204 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 PDCLQ13371 301 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 CLTCQ00610 1675 aaKnown RBP15.54■□□□□ 0.08
RUNX3-203ENST00000399916 CHST3Q7LGC8 479 aa15.54■□□□□ 0.08
RUNX3-203ENST00000399916 MAGEC2Q9UBF1 373 aaPredicted RBP15.54■□□□□ 0.08
RUNX3-203ENST00000399916 SEMA3FQ13275 785 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 MACROD2A1Z1Q3 448 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 SF3B2Q13435 895 aaKnown RBP15.53■□□□□ 0.08
RUNX3-203ENST00000399916 FAM227BQ96M60 508 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 EYA1Q99502 592 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 ZSCAN16Q9H4T2 348 aaPredicted RBP15.53■□□□□ 0.08
RUNX3-203ENST00000399916 KIF9Q9HAQ2 790 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 ANKRD18BA2A2Z9 1011 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 ENC1O14682 589 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 TBC1D8O95759 1140 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 MYL5Q02045 173 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 SPA17Q15506 151 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 SRGAP1Q7Z6B7 1085 aa15.53■□□□□ 0.08
RUNX3-203ENST00000399916 TRMT44Q8IYL2 757 aaKnown RBP15.53■□□□□ 0.08
RUNX3-203ENST00000399916 YEATS4O95619 227 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 CCDC178Q5BJE1 867 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 ARMC3Q5W041 872 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 CHPF2Q9P2E5 772 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.52■□□□□ 0.08
RUNX3-203ENST00000399916 KIAA0232Q92628 1395 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 SCRN1Q12765 414 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 DBN1Q16643 649 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 IMMTQ16891 758 aaKnown RBP15.52■□□□□ 0.08
RUNX3-203ENST00000399916 SEPT14Q6ZU15 432 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 IRX2Q9BZI1 471 aaPredicted RBP15.52■□□□□ 0.08
RUNX3-203ENST00000399916 LSG1Q9H089 658 aaKnown RBP15.52■□□□□ 0.08
RUNX3-203ENST00000399916 FANCLQ9NW38 375 aa15.52■□□□□ 0.08
RUNX3-203ENST00000399916 EDC4Q6P2E9 1401 aaKnown RBP15.52■□□□□ 0.08
RUNX3-203ENST00000399916 VPS53Q5VIR6 699 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 HIBCHQ6NVY1 386 aaPredicted RBP15.52■□□□□ 0.07
RUNX3-203ENST00000399916 IGSF22Q8N9C0 903 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 SELENOSQ9BQE4 189 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 TADA3O75528 432 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 MYO1EQ12965 1108 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 CCDC102BQ68D86 513 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 GSPT2Q8IYD1 628 aaKnown RBP15.52■□□□□ 0.07
RUNX3-203ENST00000399916 SH3GL3Q99963 347 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 SLF1Q9BQI6 1058 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 STAP2Q9UGK3 403 aa15.52■□□□□ 0.07
RUNX3-203ENST00000399916 AFMP43652 599 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 WHAMMP3Q1A5X7 153 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 CCDC40Q4G0X9 1142 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 CREB3L3Q68CJ9 461 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 SPECC1LQ69YQ0 1117 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 USH1CQ9Y6N9 552 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 H3BQF6 201 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 H2AFXP16104 143 aaPredicted RBP15.51■□□□□ 0.07
RUNX3-203ENST00000399916 DPCR1Q3MIW9 517 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 E4F1Q66K89 784 aaPredicted RBP15.51■□□□□ 0.07
RUNX3-203ENST00000399916 TPCN1Q9ULQ1 816 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 ATP1A3P13637 1013 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 CCT6AP40227 531 aaKnown RBP15.51■□□□□ 0.07
RUNX3-203ENST00000399916 UBE4AQ14139 1066 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 PLA2G4DQ86XP0 818 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 UBAC1Q9BSL1 405 aa15.51■□□□□ 0.07
RUNX3-203ENST00000399916 NEFHP12036 1026 aa15.5■□□□□ 0.07
RUNX3-203ENST00000399916 NMIQ13287 307 aaPredicted RBP15.5■□□□□ 0.07
RUNX3-203ENST00000399916 CCDC122Q5T0U0 273 aa15.5■□□□□ 0.07
RUNX3-203ENST00000399916 RPAP1Q9BWH6 1393 aaPredicted RBP15.5■□□□□ 0.07
RUNX3-203ENST00000399916 AKR1B15C9JRZ8 316 aaPredicted RBP15.5■□□□□ 0.07
RUNX3-203ENST00000399916 PPFIA1Q13136 1202 aa15.5■□□□□ 0.07
RUNX3-203ENST00000399916 SERPINA10Q9UK55 444 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms