RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 SCRN1Q12765 414 aa11.15□□□□□ -0.63
LINC00243-201ENST00000399196 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.63
LINC00243-201ENST00000399196 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.63
LINC00243-201ENST00000399196 ZNF384Q8TF68 577 aa11.15□□□□□ -0.63
LINC00243-201ENST00000399196 KIF13BQ9NQT8 1826 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 PRKAB2O43741 272 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 CTDNEP1O95476 244 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 F13A1P00488 732 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 ZNF622Q969S3 477 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00243-201ENST00000399196 MASTLQ96GX5 879 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 ARMT1Q9H993 441 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 INCENPQ9NQS7 918 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 PDS5AQ29RF7 1337 aaKnown RBP11.14□□□□□ -0.63
LINC00243-201ENST00000399196 IRS2Q9Y4H2 1338 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 CHD4Q14839 1912 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 MYH13Q9UKX3 1938 aa11.14□□□□□ -0.63
LINC00243-201ENST00000399196 C6orf229H3BNL8 230 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 ZNF213O14771 459 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 GADD45BO75293 160 aaPredicted RBP11.13□□□□□ -0.63
LINC00243-201ENST00000399196 CHRNA5P30532 468 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 SKOR2Q2VWA4 1001 aaPredicted RBP11.13□□□□□ -0.63
LINC00243-201ENST00000399196 NAA16Q6N069 864 aaPredicted RBP11.13□□□□□ -0.63
LINC00243-201ENST00000399196 CDC37L1Q7L3B6 337 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 SP8Q8IXZ3 490 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 MIGA1Q8NAN2 632 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 GPR101Q96P66 508 aaPredicted RBP11.13□□□□□ -0.63
LINC00243-201ENST00000399196 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
LINC00243-201ENST00000399196 H0YIN7 160 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 GNAT2P19087 354 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 PDE4CQ08493 712 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 C2CD5Q86YS7 1000 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 NCOA5Q9HCD5 579 aaKnown RBP11.13□□□□□ -0.63
LINC00243-201ENST00000399196 JAG2Q9Y219 1238 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 CNPY2Q9Y2B0 182 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 ATP6V0A2Q9Y487 856 aa11.13□□□□□ -0.63
LINC00243-201ENST00000399196 GSG1L2A8MUP6 293 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 SMIM22K7EJ46 135 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 PFKFB2O60825 505 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 PPFIA3O75145 1194 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 SPTY2D1Q68D10 685 aaPredicted RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 C15orf52Q6ZUT6 534 aaKnown RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 NACAP1Q9BZK3 213 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 NAPBQ9H115 298 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 SLC4A4Q9Y6R1 1079 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 DLEC1Q9Y238 1755 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 MAGEB6P1A0A0J9YX57 407 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 VPS37CA5D8V6 355 aaPredicted RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 PATL2C9JE40 543 aaKnown RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 PTMSP20962 102 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 PDIA3P30101 505 aaKnown RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 CCT2P78371 535 aaKnown RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 LARP1BQ659C4 914 aaKnown RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
LINC00243-201ENST00000399196 FAM173BQ6P4H8 233 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 CYB5R4Q7L1T6 521 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 USP48Q86UV5 1035 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 TBC1D16Q8TBP0 767 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 WDR66Q8TBY9 1149 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 TMEM63CQ9P1W3 806 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 POLLQ9UGP5 575 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 BRPF3Q9ULD4 1205 aa11.12□□□□□ -0.63
LINC00243-201ENST00000399196 BAZ2AQ9UIF9 1905 aaKnown RBP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 NEDD4P46934 1319 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 XRCC6P12956 609 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 TDO2P48775 406 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 EVCP57679 992 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 MECOMQ03112 1051 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 DNM1Q05193 864 aaKnown RBP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 TRDNQ13061 729 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 RALYLQ86SE5 291 aaKnown RBP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 FERMT3Q86UX7 667 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 DZIP1Q86YF9 867 aaKnown RBP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 IFNL3Q8IZI9 196 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 FBXL16Q8N461 479 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 MPNDQ8N594 471 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 NSUN7Q8NE18 718 aaKnown RBP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 TDRD7Q8NHU6 1098 aaKnown RBP11.11□□□□□ -0.63
LINC00243-201ENST00000399196 SMARCC2Q8TAQ2 1214 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 DDX11Q96FC9 970 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 SENP2Q9HC62 589 aa11.11□□□□□ -0.63
LINC00243-201ENST00000399196 LRRC37AA6NMS7 1700 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 SALL1Q9NSC2 1324 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 SOCS7O14512 581 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 PRC1O43663 620 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 NCLP19338 710 aaKnown RBP11.1□□□□□ -0.63
LINC00243-201ENST00000399196 POLD1P28340 1107 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 PRDX5P30044 214 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 ALX1Q15699 326 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 OLFM4Q6UX06 510 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 DPP8Q6V1X1 898 aaPredicted RBP11.1□□□□□ -0.63
LINC00243-201ENST00000399196 KCTD17Q8N5Z5 321 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 RGS22Q8NE09 1264 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 NSUN4Q96CB9 384 aaKnown RBP11.1□□□□□ -0.63
LINC00243-201ENST00000399196 PANK2Q9BZ23 570 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 CD209Q9NNX6 404 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 HPS5Q9UPZ3 1129 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 LDHBP07195 334 aaKnown RBP11.1□□□□□ -0.63
LINC00243-201ENST00000399196 KCNA3P22001 575 aa11.1□□□□□ -0.63
LINC00243-201ENST00000399196 CTDSPL2Q05D32 466 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms